RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 DEPDC1Q5TB30 811 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 MFSD4BQ5TF39 518 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 VWA5B1Q5TIE3 1220 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 YOD1Q5VVQ6 348 aaPredicted RBP12.54□□□□□ -0.4
HDAC1-208ENST00000482310 GARNL3Q5VVW2 1013 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 ABHD17CQ6PCB6 329 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 ZNF793Q6ZN11 406 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 SHISA6Q6ZSJ9 500 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 UBE3DQ7Z6J8 389 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 VASH2Q86V25 355 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 CACNA2D3Q8IZS8 1091 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 NLGN4XQ8N0W4 816 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 C1orf52Q8N6N3 182 aaKnown RBP12.54□□□□□ -0.4
HDAC1-208ENST00000482310 IL22RA1Q8N6P7 574 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 KDF1Q8NAX2 398 aaPredicted RBP12.54□□□□□ -0.4
HDAC1-208ENST00000482310 NLGN4YQ8NFZ3 816 aaPredicted RBP12.54□□□□□ -0.4
HDAC1-208ENST00000482310 PROKR1Q8TCW9 393 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 CT55Q8WUE5 264 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 GATA6Q92908 595 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 C19orf60Q96EN9 201 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 APIPQ96GX9 242 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 SEC16BQ96JE7 1060 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 C3orf30Q96M34 536 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 KCNC2Q96PR1 638 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 BRF2Q9HAW0 419 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 ZNF304Q9HCX3 659 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 LHX9Q9NQ69 397 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 IFT80Q9P2H3 777 aaPredicted RBP12.54□□□□□ -0.4
HDAC1-208ENST00000482310 TRPC4Q9UBN4 977 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 VPS29Q9UBQ0 182 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 CTSFQ9UBX1 484 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 GPN3Q9UHW5 284 aaPredicted RBP12.54□□□□□ -0.4
HDAC1-208ENST00000482310 TSC22D4Q9Y3Q8 395 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 PCDHGA7Q9Y5G6 932 aa12.54□□□□□ -0.4
HDAC1-208ENST00000482310 DMXL2Q8TDJ6 3036 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 GOLGA8QA0A0J9YX86 632 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 GOLGA8OA6NCC3 632 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 GOLGA8NF8WBI6 632 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 SLC28A1O00337 649 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 RGS14O43566 566 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 TLX3O43711 291 aaPredicted RBP12.53□□□□□ -0.4
HDAC1-208ENST00000482310 B3GALT2O43825 422 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 CDC123O75794 336 aaPredicted RBP12.53□□□□□ -0.4
HDAC1-208ENST00000482310 DXOO77932 396 aaKnown RBP12.53□□□□□ -0.4
HDAC1-208ENST00000482310 NSA2O95478 260 aaKnown RBP12.53□□□□□ -0.4
HDAC1-208ENST00000482310 KLK1P06870 262 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 FGF4P08620 206 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 RPS18P62269 152 aaKnown RBP12.53□□□□□ -0.4
HDAC1-208ENST00000482310 RPL38P63173 70 aaKnown RBP12.53□□□□□ -0.4
HDAC1-208ENST00000482310 DCDP81605 110 aaKnown RBP12.53□□□□□ -0.4
HDAC1-208ENST00000482310 SRSF6Q13247 344 aaKnown RBP12.53□□□□□ -0.4
HDAC1-208ENST00000482310 ADPRMQ3LIE5 342 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 NKAIN1Q4KMZ8 207 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 TMEM35AQ53FP2 167 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 MANEAQ5SRI9 462 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 ZNF385CQ66K41 422 aaPredicted RBP12.53□□□□□ -0.4
HDAC1-208ENST00000482310 OR4C11Q6IEV9 310 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 IGF2-ASQ6U949 168 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 CYP20A1Q6UW02 462 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 COX15Q7KZN9 410 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 COMMD6Q7Z4G1 85 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 TMEM151BQ8IW70 566 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 WDR75Q8IWA0 830 aaKnown RBP12.53□□□□□ -0.4
HDAC1-208ENST00000482310 ESX1Q8N693 406 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 EFCAB3Q8N7B9 438 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 FAM47BQ8NA70 645 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 PEX11GQ96HA9 241 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 ZNF578Q96N58 590 aaPredicted RBP12.53□□□□□ -0.4
HDAC1-208ENST00000482310 DCBLD2Q96PD2 775 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 CCDC86Q9H6F5 360 aaKnown RBP12.53□□□□□ -0.4
HDAC1-208ENST00000482310 PRDM7Q9NQW5 492 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 CROTQ9UKG9 612 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 FBXW2Q9UKT8 454 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 CDC14AQ9UNH5 594 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.53□□□□□ -0.4
HDAC1-208ENST00000482310 POLR3HQ9Y535 204 aaPredicted RBP12.53□□□□□ -0.4
HDAC1-208ENST00000482310 SLC22A7Q9Y694 548 aa12.53□□□□□ -0.4
HDAC1-208ENST00000482310 A0A088AWK7 358 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 LOC101059948A0A1B0GTJ6 334 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 C9J4A7 227 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 PEX11AO75192 247 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 SEC22BO75396 215 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 PRKRAO75569 313 aaKnown RBP12.52□□□□□ -0.41
HDAC1-208ENST00000482310 SMIM10L1P0DMW3 83 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 HSD3B1P14060 373 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 TCN2P20062 427 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 ZNF10P21506 573 aaPredicted RBP12.52□□□□□ -0.41
HDAC1-208ENST00000482310 HIST1H1TP22492 207 aaPredicted RBP12.52□□□□□ -0.41
HDAC1-208ENST00000482310 ATP5A1P25705 553 aaKnown RBP12.52□□□□□ -0.41
HDAC1-208ENST00000482310 HSD3B2P26439 372 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 CD82P27701 267 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 BSGP35613 385 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 DLSTP36957 453 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 EMP3P54852 163 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 MTTPP55157 894 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 PCBP4P57723 403 aaKnown RBP12.52□□□□□ -0.41
HDAC1-208ENST00000482310 ACSM2AQ08AH3 577 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 SLAMF1Q13291 335 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 CUL3Q13618 768 aa12.52□□□□□ -0.41
HDAC1-208ENST00000482310 RUNX2Q13950 521 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms