RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 MAP2K7O14733 419 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 CTSVO60911 334 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 VPS26AO75436 327 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 NDUFS3O75489 264 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 USP1O94782 785 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 MATN4O95460 622 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 FTCDO95954 541 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 APRTP07741 180 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 CYC1P08574 325 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 STSP08842 583 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 RNF224P0DH78 156 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 ERGP11308 486 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 PKMP14618 531 aaKnown RBP6.13□□□□□ -1.43
LRCH3-216ENST00000481048 CXCR2P25025 360 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 CMPK1P30085 196 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 DCTP40126 519 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 GRIA1P42261 906 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 CSE1LP55060 971 aaKnown RBP6.13□□□□□ -1.43
LRCH3-216ENST00000481048 VSX2P58304 361 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-216ENST00000481048 SARNPP82979 210 aaKnown RBP6.13□□□□□ -1.43
LRCH3-216ENST00000481048 KLC1Q07866 573 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 DBPQ10586 325 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-216ENST00000481048 CDC16Q13042 620 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 MFAP5Q13361 173 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 SEMA3AQ14563 771 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 CCNG2Q16589 344 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 SMN1Q16637 294 aaKnown RBP6.13□□□□□ -1.43
LRCH3-216ENST00000481048 ANKRD20A4Q4UJ75 823 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 RNF187Q5TA31 235 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-216ENST00000481048 HIST2H2BCQ6DN03 193 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 MRNIPQ6NTE8 343 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 FBXO42Q6P3S6 717 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 RNF44Q7L0R7 432 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 NDUFAF7Q7L592 441 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 SLC13A5Q86YT5 568 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-216ENST00000481048 BCORP1Q8N888 145 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 ACRBPQ8NEB7 543 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 OR2L3Q8NG85 312 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.13□□□□□ -1.43
LRCH3-216ENST00000481048 STT3BQ8TCJ2 826 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 MIEF2Q96C03 454 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 THOC3Q96J01 351 aaKnown RBP6.13□□□□□ -1.43
LRCH3-216ENST00000481048 IL17FQ96PD4 163 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 CRB3Q9BUF7 120 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 KIFC1Q9BW19 673 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 TRIM8Q9BZR9 551 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 TSGA10Q9BZW7 698 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 C12orf65Q9H3J6 166 aaKnown RBP6.13□□□□□ -1.43
LRCH3-216ENST00000481048 IPPKQ9H8X2 491 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 HOMER3Q9NSC5 361 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 TREX1Q9NSU2 369 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 C14orf105Q9NVL8 296 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 KLHL42Q9P2K6 505 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 PACSIN2Q9UNF0 486 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-216ENST00000481048 NTNG1Q9Y2I2 539 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 KLHL20Q9Y2M5 609 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 POLQO75417 2590 aa6.13□□□□□ -1.43
LRCH3-216ENST00000481048 NSG1A0A0A6YYJ2 146 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 TRAV17A0A0B4J275 112 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 A0A0J9YVX5 310 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 A0A1W2PPV9 198 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 MAGEB16A2A368 324 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 HNRNPRO43390 633 aaKnown RBP6.12□□□□□ -1.43
LRCH3-216ENST00000481048 CCNDBP1O95273 360 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 BMP10O95393 424 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 SERPINA7P05543 415 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 ERVK-10P10266 1014 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 HRH2P25021 359 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 MCM3P25205 808 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 SLC26A3P40879 764 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 OR1D4P47884 311 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 EMP2P54851 167 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 PRDX1Q06830 199 aaKnown RBP6.12□□□□□ -1.43
LRCH3-216ENST00000481048 FAM53BQ14153 422 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 GBX1Q14549 363 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 ZRSR2Q15696 482 aaKnown RBP6.12□□□□□ -1.43
LRCH3-216ENST00000481048 TYSND1Q2T9J0 566 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 PRTGQ2VWP7 1150 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 ZNF324BQ6AW86 544 aaPredicted RBP6.12□□□□□ -1.43
LRCH3-216ENST00000481048 MTFR2Q6P444 385 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 LRRC8BQ6P9F7 803 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 FAM180AQ6UWF9 173 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 NEK10Q6ZWH5 1172 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 TMEM139Q8IV31 216 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 KRT222Q8N1A0 295 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 C2orf73Q8N5S3 287 aaPredicted RBP6.12□□□□□ -1.43
LRCH3-216ENST00000481048 CELF2-AS1Q8N7Q2 184 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 OR9A1PQ8NGU1 263 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 LKAAEAR1Q8TD35 194 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 SKA2Q8WVK7 121 aaPredicted RBP6.12□□□□□ -1.43
LRCH3-216ENST00000481048 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.12□□□□□ -1.43
LRCH3-216ENST00000481048 ATG4AQ8WYN0 398 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 SMPDL3AQ92484 453 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 BIRC8Q96P09 236 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 EBNA1BP2Q99848 306 aaKnown RBP6.12□□□□□ -1.43
LRCH3-216ENST00000481048 SLX1AQ9BQ83 275 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 DPH7Q9BTV6 452 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 ZNF407Q9C0G0 2248 aa6.12□□□□□ -1.43
LRCH3-216ENST00000481048 MRPS30Q9NP92 439 aaKnown RBP6.12□□□□□ -1.43
LRCH3-216ENST00000481048 MKKSQ9NPJ1 570 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms