RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 COPS7BQ9H9Q2 264 aaPredicted RBP16.7■□□□□ 0.26
UPF3A-206ENST00000480362 IRAK4Q9NWZ3 460 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 SLC22A7Q9Y694 548 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 TMEM150CB9EJG8 249 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 TMPRSS11DO60235 418 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 PRMT3O60678 531 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 KIAA0754O94854 1291 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 MSL3P1P0C860 447 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 PRPS1L1P21108 318 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 CALB2P22676 271 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 CPA2P48052 419 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 MTTPP55157 894 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 KCNK10P57789 538 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 C2orf80Q0P641 193 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 SLAMF1Q13291 335 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 COL9A2Q14055 689 aaPredicted RBP16.69■□□□□ 0.26
UPF3A-206ENST00000480362 SPRED3Q2MJR0 410 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 DEFB134Q4QY38 66 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 LACTB2Q53H82 288 aaPredicted RBP16.69■□□□□ 0.26
UPF3A-206ENST00000480362 ASCL5Q7RTU5 278 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 YTHDF3Q7Z739 585 aaKnown RBP16.69■□□□□ 0.26
UPF3A-206ENST00000480362 RIMKLAQ8IXN7 391 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 TMEM132CQ8N3T6 1108 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 ZCCHC7Q8N3Z6 543 aaKnown RBP16.69■□□□□ 0.26
UPF3A-206ENST00000480362 GLB1L3Q8NCI6 653 aaPredicted RBP16.69■□□□□ 0.26
UPF3A-206ENST00000480362 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.69■□□□□ 0.26
UPF3A-206ENST00000480362 TM4SF18Q96CE8 201 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 CLMPQ9H6B4 373 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 MYNNQ9NPC7 610 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 TXLNGQ9NUQ3 528 aa16.69■□□□□ 0.26
UPF3A-206ENST00000480362 ASCC3Q8N3C0 2202 aaKnown RBP16.69■□□□□ 0.26
UPF3A-206ENST00000480362 A0A088AWK7 358 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.68■□□□□ 0.26
UPF3A-206ENST00000480362 HYKKA2RU49 373 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 FITM1A5D6W6 292 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 AGRPO00253 132 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 ATP5HO75947 161 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 OR2B3O76000 313 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 SCELO95171 688 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 IL3P08700 152 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 FAM58BPP0C7Q3 252 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 ZNF10P21506 573 aaPredicted RBP16.68■□□□□ 0.26
UPF3A-206ENST00000480362 CERS1P27544 350 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 CLNS1AP54105 237 aaKnown RBP16.68■□□□□ 0.26
UPF3A-206ENST00000480362 C21orf58P58505 322 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 TRA2BP62995 288 aaKnown RBP16.68■□□□□ 0.26
UPF3A-206ENST00000480362 E2F1Q01094 437 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 ZFP36L1Q07352 338 aaKnown RBP16.68■□□□□ 0.26
UPF3A-206ENST00000480362 STX5Q13190 355 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 ILKQ13418 452 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 TRA2AQ13595 282 aaKnown RBP eCLIP16.68■□□□□ 0.261e-9■■■■□ 26.1
UPF3A-206ENST00000480362 SLC9A5Q14940 896 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 NDUFA9Q16795 377 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 VPS26BQ4G0F5 336 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 FAM71E1Q6IPT2 247 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 B3GNT8Q7Z7M8 397 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 ARHGEF39Q8N4T4 335 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 OR1L3Q8NH93 324 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 TSPEARQ8WU66 669 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 ZNF501Q96CX3 271 aaPredicted RBP16.68■□□□□ 0.26
UPF3A-206ENST00000480362 SPDL1Q96EA4 605 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 SERINC2Q96SA4 455 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 SLC25A23Q9BV35 468 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 SLC52A3Q9NQ40 469 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 FGF21Q9NSA1 209 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 SERTAD3Q9UJW9 196 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 MAPRE3Q9UPY8 281 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 EXO1Q9UQ84 846 aaKnown RBP16.68■□□□□ 0.26
UPF3A-206ENST00000480362 WBP11Q9Y2W2 641 aaKnown RBP16.68■□□□□ 0.26
UPF3A-206ENST00000480362 LAMA1P25391 3075 aa16.68■□□□□ 0.26
UPF3A-206ENST00000480362 CCDC154A6NI56 674 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 H3BMH7 237 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 RFPL3O75679 317 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 UNC5CO95185 931 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 IL1RNP18510 177 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 CAPN3P20807 821 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 GSTM5P46439 218 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 DGKQP52824 942 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 MC1RQ01726 317 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 ACY1Q03154 408 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 RCAN2Q14206 197 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 GRM7Q14831 915 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 TRIP6Q15654 476 aaKnown RBP16.67■□□□□ 0.26
UPF3A-206ENST00000480362 PGS1Q32NB8 556 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 FAM174BQ3ZCQ3 159 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 GARNL3Q5VVW2 1013 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 MRM1Q6IN84 353 aaKnown RBP16.67■□□□□ 0.26
UPF3A-206ENST00000480362 PRSS41Q7RTY9 318 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 TTC29Q8NA56 475 aaPredicted RBP16.67■□□□□ 0.26
UPF3A-206ENST00000480362 VPS33AQ96AX1 596 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 TESCQ96BS2 214 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 C10orf90Q96M02 699 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 REEP4Q9H6H4 257 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 FANCEQ9HB96 536 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 ANKHQ9HCJ1 492 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 ENAMQ9NRM1 1142 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 LYARQ9NX58 379 aaKnown RBP16.67■□□□□ 0.26
UPF3A-206ENST00000480362 FBXW2Q9UKT8 454 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 NAALAD2Q9Y3Q0 740 aa16.67■□□□□ 0.26
UPF3A-206ENST00000480362 ASB4Q9Y574 426 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms