RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ZNF485Q8NCK3 441 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 GMCL1P1Q8NEA9 526 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 DENND6BQ8NEG7 585 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 NUP37Q8NFH4 326 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 SHC3Q92529 594 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 ST6GALNAC6Q969X2 333 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 C2orf48Q96LS8 159 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 TRIM15Q9C019 465 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 SLC5A7Q9GZV3 580 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 HOXD1Q9GZZ0 328 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 UPF3AQ9H1J1 476 aaKnown RBP3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 LMAN1LQ9HAT1 526 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 PHPT1Q9NRX4 125 aaPredicted RBP3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 CYP39A1Q9NYL5 469 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 HACD3Q9P035 362 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 EXTL2Q9UBQ6 330 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 ASIC3Q9UHC3 531 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 CTNNA3Q9UI47 895 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 RPH3AQ9Y2J0 694 aaPredicted RBP3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 ATP8B3O60423 1300 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 TRAV18A0A075B6X5 111 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 A0A1B0GU03 582 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 C5orf52A6NGY3 159 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 SLC1A7O00341 560 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 KLHL41O60662 606 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 CYTIPO60759 359 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 PEX11AO75192 247 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 PALMO75781 387 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 CEACAM4O75871 244 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 MOCS2O96007 188 aaPredicted RBP3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 CD59P13987 128 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 LBPP18428 481 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 PSMB4P28070 264 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 DUTP33316 252 aaKnown RBP3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 ACAA2P42765 397 aaKnown RBP3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 CAMLGP49069 296 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 HNMTP50135 292 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 NME5P56597 212 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 CLDN17P56750 224 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 GSCP56915 257 aaPredicted RBP3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 SRSF9Q13242 221 aaKnown RBP eCLIP3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 CES4AQ5XG92 561 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 BTNL8Q6UX41 500 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 KIF6Q6ZMV9 814 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 RGS9BPQ6ZS82 235 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 PIGWQ7Z7B1 504 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 PRUNE1Q86TP1 453 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 CATSPERDQ86XM0 798 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 CROCCP3Q8IVE0 287 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 OR4D10Q8NGI6 311 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 NCOA7Q8NI08 942 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 RIT1Q92963 219 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 ZNF689Q96CS4 500 aaPredicted RBP3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 BSCL2Q96G97 398 aaPredicted RBP3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 C18orf12Q96KH6 178 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 FAM111AQ96PZ2 611 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 CACNG6Q9BXT2 260 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 ABCG8Q9H221 673 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 B3GAT2Q9NPZ5 323 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 TEX10Q9NXF1 929 aaPredicted RBP3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 ARMCX3Q9UH62 379 aaPredicted RBP3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 LEF1Q9UJU2 399 aaPredicted RBP3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 CDH7Q9ULB5 785 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 AURKCQ9UQB9 309 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 NPHP3Q7Z494 1330 aa3.34□□□□□ -1.87
SMARCA1-204ENST00000478420 MTMR11A4FU01 709 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 MPTX1A8MV57 137 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 PRSS46E5RG02 174 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 UBXN8O00124 270 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 CACNB4O00305 520 aaPredicted RBP3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 SORBS2O94875 1100 aaKnown RBP3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 LETM1O95202 739 aaPredicted RBP3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 TRIM16O95361 564 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 ALPPP05187 535 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 ALPPL2P10696 532 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 PDHBP11177 359 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 UGT1A4P22310 534 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 RPA1P27694 616 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 RBMS1P29558 406 aaKnown RBP3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 SSTR1P30872 391 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 CASQ1P31415 396 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 SOAT1P35610 550 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 KCNJ1P48048 391 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 KIAA1024LP59773 190 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 ASIC1P78348 528 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 IRX4P78413 519 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 ARF5P84085 180 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 FASTKD3Q14CZ7 662 aaKnown RBP3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 RPS6KA1Q15418 735 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 TRADDQ15628 312 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 C12orf60Q5U649 245 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 FBXL22Q6P050 247 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 METTL7BQ6UX53 244 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 FRRS1Q6ZNA5 592 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 LPCAT2Q7L5N7 544 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 GPR141Q7Z602 305 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 ADCK1Q86TW2 530 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 ZNF440Q8IYI8 595 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 FBXW8Q8N3Y1 598 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 NHLRC2Q8NBF2 726 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms