RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 CRLF3Q8IUI8 442 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 HOMEZQ8IX15 550 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 GBP7Q8N8V2 638 aaPredicted RBP14.54□□□□□ -0.08
SEC13-215ENST00000477547 OR9A4Q8NGU2 314 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 LRFN5Q96NI6 719 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 GBP5Q96PP8 586 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 NAALAD2Q9Y3Q0 740 aa14.54□□□□□ -0.08
SEC13-215ENST00000477547 A0A088AWK7 358 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 RTCAO00442 366 aaKnown RBP14.53□□□□□ -0.08
SEC13-215ENST00000477547 PLPP1O14494 284 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 ATXN7O15265 892 aaPredicted RBP14.53□□□□□ -0.08
SEC13-215ENST00000477547 FOXS1O43638 330 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 RDH16O75452 317 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 NSA2O95478 260 aaKnown RBP14.53□□□□□ -0.08
SEC13-215ENST00000477547 B3GALT4O96024 378 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 KITP10721 976 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 ZNF10P21506 573 aaPredicted RBP14.53□□□□□ -0.08
SEC13-215ENST00000477547 FBLP22087 321 aaKnown RBP14.53□□□□□ -0.08
SEC13-215ENST00000477547 MDH1P40925 334 aaKnown RBP14.53□□□□□ -0.08
SEC13-215ENST00000477547 AVPR1BP47901 424 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 NR6A1Q15406 480 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 DEPDC1Q5TB30 811 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 ZNF385CQ66K41 422 aaPredicted RBP14.53□□□□□ -0.08
SEC13-215ENST00000477547 PRMT9Q6P2P2 845 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 ABHD17CQ6PCB6 329 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 C6orf15Q6UXA7 325 aaPredicted RBP14.53□□□□□ -0.08
SEC13-215ENST00000477547 RNF165Q6ZSG1 346 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 ZNF605Q86T29 641 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 PDSS2Q86YH6 399 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 DSELQ8IZU8 1212 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 NLGN4XQ8N0W4 816 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 ESX1Q8N693 406 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 SRFBP1Q8NEF9 429 aaKnown RBP14.53□□□□□ -0.08
SEC13-215ENST00000477547 NLGN4YQ8NFZ3 816 aaPredicted RBP14.53□□□□□ -0.08
SEC13-215ENST00000477547 MR1Q95460 341 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 RGMAQ96B86 450 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 C19orf60Q96EN9 201 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 MMABQ96EY8 250 aaPredicted RBP14.53□□□□□ -0.08
SEC13-215ENST00000477547 FAR2Q96K12 515 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 ZNF578Q96N58 590 aaPredicted RBP14.53□□□□□ -0.08
SEC13-215ENST00000477547 KCNC2Q96PR1 638 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 MRPL1Q9BYD6 325 aaKnown RBP14.53□□□□□ -0.08
SEC13-215ENST00000477547 TUBB1Q9H4B7 451 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 PNPOQ9NVS9 261 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 NMRK1Q9NWW6 199 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 PSD3Q9NYI0 1048 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 ACSL6Q9UKU0 697 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 CDC14AQ9UNH5 594 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 MAU2Q9Y6X3 613 aa14.53□□□□□ -0.08
SEC13-215ENST00000477547 SERTM1A2A2V5 107 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 TCP11X1B4DZS4 312 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.52□□□□□ -0.08
SEC13-215ENST00000477547 SGK494L7N484 410 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 MEN1O00255 615 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 SLC28A1O00337 649 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 RAD1O60671 282 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 GALR3O60755 368 aaPredicted RBP14.52□□□□□ -0.08
SEC13-215ENST00000477547 JUNP05412 331 aaKnown RBP14.52□□□□□ -0.08
SEC13-215ENST00000477547 KLK3P07288 261 aaPredicted RBP14.52□□□□□ -0.08
SEC13-215ENST00000477547 LINC00032P0C843 101 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 ITGAXP20702 1163 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 AGXTP21549 392 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 CERS1P27544 350 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 OR1D4P47884 311 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 BTN3A2P78410 334 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 ABHD18Q0P651 414 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 DSG2Q14126 1118 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 MAP7Q14244 749 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 UGT3A2Q3SY77 523 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 NKAIN1Q4KMZ8 207 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 XKR7Q5GH72 579 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 NIPAL1Q6NVV3 410 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 TIPARPQ7Z3E1 657 aaKnown RBP14.52□□□□□ -0.08
SEC13-215ENST00000477547 TRIM46Q7Z4K8 759 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 UBE3DQ7Z6J8 389 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 NUDT13Q86X67 352 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 ZNF843Q8N446 348 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.52□□□□□ -0.08
SEC13-215ENST00000477547 PPP1R36Q96LQ0 422 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 TBCDQ9BTW9 1192 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 SORBS1Q9BX66 1292 aaKnown RBP14.52□□□□□ -0.08
SEC13-215ENST00000477547 ROGDIQ9GZN7 287 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 HCN3Q9P1Z3 774 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 VPS29Q9UBQ0 182 aa14.52□□□□□ -0.08
SEC13-215ENST00000477547 NAV2Q8IVL1 2488 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 C9J4A7 227 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 H0YIG0 161 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 RGS14O43566 566 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 B3GALT2O43825 422 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 RSL1D1O76021 490 aaKnown RBP14.51□□□□□ -0.09
SEC13-215ENST00000477547 SMIM10L1P0DMW3 83 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 LIPCP11150 499 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 MTTPP55157 894 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 PCBP4P57723 403 aaKnown RBP14.51□□□□□ -0.09
SEC13-215ENST00000477547 OLR1P78380 273 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 DCDP81605 110 aaKnown RBP14.51□□□□□ -0.09
SEC13-215ENST00000477547 BTKQ06187 659 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 ACSM2AQ08AH3 577 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 AP5B1Q2VPB7 878 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 SPIN4Q56A73 249 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms