RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 SYN1P17600 705 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 AVPR1BP47901 424 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 COMMD6Q7Z4G1 85 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 COX18Q8N8Q8 333 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 RAB8BQ92930 207 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 C17orf62Q9BQA9 187 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 ERVK-18Q9QC07 812 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 BTNL2Q9UIR0 455 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 CDC14AQ9UNH5 594 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 ADRB3P13945 408 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 MAGP20916 626 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 BIKQ13323 160 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 PPP2R2DQ66LE6 453 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 AKAP14Q86UN6 197 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 FAM98AQ8NCA5 519 aaKnown RBP14.06□□□□□ -0.16
HDAC6-220ENST00000477528 FAM46DQ8NEK8 389 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 FAM129BQ96TA1 746 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 ANKHQ9HCJ1 492 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 GMPR2Q9P2T1 348 aaKnown RBP14.06□□□□□ -0.16
HDAC6-220ENST00000477528 RNF6Q9Y252 685 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 OR6A2O95222 327 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 C1SP09871 688 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 VEZF1Q14119 521 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 COLEC12Q5KU26 742 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 C12orf76Q8N812 135 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-220ENST00000477528 OR52N2Q8NGI0 321 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 GNAO1P09471 354 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 MATN1P21941 496 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 SDC2P34741 201 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 VIPR2P41587 438 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 CD47Q08722 323 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 GGTA1PQ4G0N0 100 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 CPZQ66K79 652 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 CLIP4Q8N3C7 705 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 DIRAS2Q96HU8 199 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 P2RY12Q9H244 342 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 ADAP2Q9NPF8 381 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 RHCGQ9UBD6 479 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 SARDHQ9UL12 918 aa14.06□□□□□ -0.16
HDAC6-220ENST00000477528 HEPACAM2A8MVW5 462 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 ZNF701M0R085 212 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-220ENST00000477528 GTPBP1O00178 669 aaKnown RBP14.05□□□□□ -0.16
HDAC6-220ENST00000477528 PEX11BO96011 259 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 TFAP2AP05549 437 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 TIMP2P16035 220 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 RAB8AP61006 207 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 BTN3A2P78410 334 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 GRM2Q14416 872 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 EXOC3L2Q2M3D2 409 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 SHKBP1Q8TBC3 707 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 COL11A1P12107 1806 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-220ENST00000477528 RIIAD1A6NNX1 92 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 PAK4O96013 591 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-220ENST00000477528 STATHP02808 62 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 ZNF8P17098 575 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-220ENST00000477528 SELPLGQ14242 412 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 NFE2L1Q14494 772 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 ITPRIPL2Q3MIP1 535 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 XKR7Q5GH72 579 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 KLHL17Q6TDP4 642 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 IKBIPQ70UQ0 350 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 GAREM2Q75VX8 874 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 RNF44Q7L0R7 432 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 FAM220AQ7Z4H9 259 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 GPR149Q86SP6 731 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 GALNT10Q86SR1 603 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 TSPYL5Q86VY4 417 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-220ENST00000477528 C16orf78Q8WTQ4 265 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 FRS2Q8WU20 508 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 ANKRD12Q6UB98 2062 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 CLDN4O14493 209 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 B4GALT3O60512 393 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 ETFAP13804 333 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 SMSP52788 366 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 RGNQ15493 299 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 ALG1LQ6GMV1 187 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 RTL10Q7L3V2 364 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 PTRH1Q86Y79 214 aaKnown RBP14.05□□□□□ -0.16
HDAC6-220ENST00000477528 CAMKVQ8NCB2 501 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 UFD1Q92890 307 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 DPEP2Q9H4A9 486 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 DZANK1Q9NVP4 752 aa14.05□□□□□ -0.16
HDAC6-220ENST00000477528 FAM47E-STBD1D6RA91 191 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 TBX1O43435 398 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 MT-ND2P03891 347 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 HK3P52790 923 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 LASP1Q14847 261 aaKnown RBP14.04□□□□□ -0.16
HDAC6-220ENST00000477528 LIPIQ6XZB0 460 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 ABHD13Q7L211 337 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 SPRED1Q7Z699 444 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.04□□□□□ -0.16
HDAC6-220ENST00000477528 RBM18Q96H35 190 aaKnown RBP14.04□□□□□ -0.16
HDAC6-220ENST00000477528 F2RL3Q96RI0 385 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 NPLQ9BXD5 320 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-220ENST00000477528 MIR1-1HGQ9H1L0 117 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 SFXN1Q9H9B4 322 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 PHF11Q9UIL8 331 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 RBBP6Q7Z6E9 1792 aaKnown RBP14.04□□□□□ -0.16
HDAC6-220ENST00000477528 PRKAR1AP10644 381 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 IL12RB1P42701 662 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms