RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 FMO4P31512 558 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 ARRB2P32121 409 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 TNFSF8P32971 234 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 TGFBR2P37173 567 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 BCL6P41182 706 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 BRCC3P46736 316 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 RFX2P48378 723 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 PXNP49023 591 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 CSRP3P50461 194 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 CLCN3P51790 818 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 ATXN3P54252 364 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 CLDN20P56880 219 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 RPS6P62753 249 aaKnown RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 EEF1A1P68104 462 aaKnown RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 CD83Q01151 205 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 IL5RAQ01344 420 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 SLC25A11Q02978 314 aaKnown RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 EMX2Q04743 252 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 EEF1A2Q05639 463 aaKnown RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 FGL1Q08830 312 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 LRRC74AQ0VAA2 488 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 KCNAB2Q13303 367 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 BTN1A1Q13410 526 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 RPS6KA2Q15349 733 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 SF3A2Q15428 464 aaKnown RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 SNRNP35Q16560 246 aaKnown RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 MEP1AQ16819 746 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 PFKFB4Q16877 469 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 IMPG1Q17R60 797 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 KCTD19Q17RG1 926 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 MICBQ29980 383 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 UGT3A2Q3SY77 523 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 RNF212Q495C1 297 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 GPR33Q49SQ1 333 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 PABPC1L2AQ5JQF8 200 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 EEF1A1P5Q5VTE0 462 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 NXNL2Q5VZ03 156 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 CD276Q5ZPR3 534 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 GLYATQ6IB77 296 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 LIN54Q6MZP7 749 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 SLC27A4Q6P1M0 643 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 C19orf48Q6RUI8 117 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 CCDC149Q6ZUS6 474 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 ANKS3Q6ZW76 656 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 RAB11FIP2Q7L804 512 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 SLC26A9Q7LBE3 791 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 CHST15Q7LFX5 561 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 ZNF367Q7RTV3 350 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 GPR155Q7Z3F1 870 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 BNIPLQ7Z465 357 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 KDELC2Q7Z4H8 507 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 C11orf96Q7Z7L8 435 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 LHFPL3Q86UP9 236 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 JAZF1Q86VZ6 243 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 ZC3HC1Q86WB0 502 aaKnown RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 SNX29P2Q8IUI4 249 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 FAM9CQ8IZT9 166 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 CLDN22Q8N7P3 220 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 UXS1Q8NBZ7 420 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 ZBTB44Q8NCP5 570 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 FAM156AQ8NDB6 213 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 ZNF540Q8NDQ6 660 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 C19orf18Q8NEA5 215 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 LPCAT1Q8NF37 534 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 OR4M2Q8NGB6 313 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 OR4M1Q8NGD0 313 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 CLHC1Q8NHS4 586 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 NEU4Q8WWR8 484 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 POMGNT1Q8WZA1 660 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 TMBIM1Q969X1 311 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 TMEM125Q96AQ2 219 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 REPS1Q96D71 796 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 MFSD3Q96ES6 412 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 CERS2Q96G23 380 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 TRMT2BQ96GJ1 504 aaKnown RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 PPP1R2P1Q96PQ5 205 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 RNF157Q96PX1 679 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 TRNT1Q96Q11 434 aaKnown RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 SIGLEC11Q96RL6 698 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 RIT2Q99578 217 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 NPAS1Q99742 590 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 P2RY13Q9BPV8 354 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 ZNF670Q9BS34 389 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 NTPCRQ9BSD7 190 aaKnown RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 HDHD5Q9BXW7 423 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 POLR1EQ9GZS1 481 aaKnown RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 SRRQ9GZT4 340 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 ABCG4Q9H172 646 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 OR51M1Q9H341 326 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 ZNF334Q9HCZ1 680 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 TXNRD2Q9NNW7 524 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 EQTNQ9NQ60 294 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 UFSP2Q9NUQ7 469 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 DNAJC11Q9NVH1 559 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 RBFOX1Q9NWB1 397 aaKnown RBP4.53□□□□□ -1.68
PTCD3-212ENST00000477520 ACTR10Q9NZ32 417 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 CCDC167Q9P0B6 97 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 COPZ2Q9P299 210 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 ASH2LQ9UBL3 628 aa4.53□□□□□ -1.68
PTCD3-212ENST00000477520 MALT1Q9UDY8 824 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms