RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 SMURF2Q9HAU4 748 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 FGF22Q9HCT0 170 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 TMEM184CQ9NVA4 438 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 DDX18Q9NVP1 670 aaKnown RBP9.37□□□□□ -0.91
USP39-214ENST00000474572 FAM118AQ9NWS6 357 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 PTTG2Q9NZH5 202 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 C3orf18Q9UK00 162 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 PCOLCE2Q9UKZ9 415 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 KCNK6Q9Y257 313 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 PADI2Q9Y2J8 665 aa9.37□□□□□ -0.91
USP39-214ENST00000474572 A0A0A6YYD5 115 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 PRSS38A1L453 326 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 GNGT2O14610 69 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 LCMT2O60294 686 aaKnown RBP9.36□□□□□ -0.91
USP39-214ENST00000474572 KRT75O95678 551 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 ZNF682O95780 498 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 ETFAP13804 333 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 UQCRC2P22695 453 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 BMP8BP34820 402 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 AHRP35869 848 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 RXRGP48443 463 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 RAD23AP54725 363 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 CDH15P55291 814 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 PCBP3P57721 371 aaKnown RBP9.36□□□□□ -0.91
USP39-214ENST00000474572 PCBP4P57723 403 aaKnown RBP9.36□□□□□ -0.91
USP39-214ENST00000474572 SFSWAPQ12872 951 aaKnown RBP9.36□□□□□ -0.91
USP39-214ENST00000474572 KCNAB2Q13303 367 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 LSAMPQ13449 338 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 SPIDRQ14159 915 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 NFATC4Q14934 902 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 NUMA1Q14980 2115 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 HEPACAMQ14CZ8 416 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 RPE65Q16518 533 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 ZNF630Q2M218 657 aaPredicted RBP9.36□□□□□ -0.91
USP39-214ENST00000474572 TMEM35AQ53FP2 167 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 CRB2Q5IJ48 1285 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 COX20Q5RI15 118 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 RBM48Q5RL73 367 aaKnown RBP9.36□□□□□ -0.91
USP39-214ENST00000474572 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.36□□□□□ -0.91
USP39-214ENST00000474572 ZNF691Q5VV52 312 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 SAXO2Q658L1 398 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 KDM4DQ6B0I6 523 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 ZNF425Q6IV72 752 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 TRIM40Q6P9F5 258 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 TSEN54Q7Z6J9 526 aaKnown RBP9.36□□□□□ -0.91
USP39-214ENST00000474572 THAP5Q7Z6K1 395 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 ARL10Q8N8L6 244 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 RGMAQ96B86 450 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 SIPA1Q96FS4 1042 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 MRGPRX1Q96LB2 322 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 MUS81Q96NY9 551 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 F2RL3Q96RI0 385 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 SORBS1Q9BX66 1292 aaKnown RBP9.36□□□□□ -0.91
USP39-214ENST00000474572 OSGEPL1Q9H4B0 414 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 CXorf36Q9H7Y0 433 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 SLC6A20Q9NP91 592 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 IMP3Q9NV31 184 aaKnown RBP9.36□□□□□ -0.91
USP39-214ENST00000474572 CLDND1Q9NY35 253 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 TAS2R7Q9NYW3 318 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 SPASTQ9UBP0 616 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 FAF1Q9UNN5 650 aaPredicted RBP9.36□□□□□ -0.91
USP39-214ENST00000474572 NCKAP1Q9Y2A7 1128 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 PLEKHM1Q9Y4G2 1056 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 HEBP2Q9Y5Z4 205 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 HEATR5BQ9P2D3 2071 aa9.36□□□□□ -0.91
USP39-214ENST00000474572 TBC1D3DA0A087WVF3 549 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 TBC1D3IA0A087WXS9 549 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 TBC1D3EA0A087X179 549 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 TBC1D3KA0A087X1G2 549 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 FEZF1A0PJY2 475 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 TBC1D3FA6NER0 549 aaPredicted RBP9.35□□□□□ -0.91
USP39-214ENST00000474572 SHISA7A6NL88 538 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 TBC1D3LB9A6J9 549 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 H7BY64 318 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 ZNF701M0R085 212 aaPredicted RBP9.35□□□□□ -0.91
USP39-214ENST00000474572 RTCAO00442 366 aaKnown RBP9.35□□□□□ -0.91
USP39-214ENST00000474572 TOR1BO14657 336 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 TNFRSF10CO14798 259 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 PDPK1O15530 556 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 LATO43561 262 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 TMPRSS11DO60235 418 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 KDM1AO60341 852 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 APBB3O95704 486 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 CPNE6O95741 557 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 TBC1D3HP0C7X1 549 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 JUNBP17275 347 aaPredicted RBP9.35□□□□□ -0.91
USP39-214ENST00000474572 CDH2P19022 906 aaPredicted RBP9.35□□□□□ -0.91
USP39-214ENST00000474572 NDUFS1P28331 727 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 RYKP34925 604 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 PIGAP37287 484 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 MAPK12P53778 367 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 GABARAPL2P60520 117 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 SELENOWP63302 87 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 CYP4F2P78329 520 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 HYAL2Q12891 473 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 SCARB2Q14108 478 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 SLC5A12Q1EHB4 618 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 ZIK1Q3SY52 487 aaPredicted RBP9.35□□□□□ -0.91
USP39-214ENST00000474572 ANKRD34AQ69YU3 496 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 TBC1D3GQ6DHY5 549 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms