RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 BTN3A2P78410 334 aa17.4■□□□□ 0.38
COL7A1-209ENST00000474432 E2F2Q14209 437 aa17.4■□□□□ 0.38
COL7A1-209ENST00000474432 MEP1AQ16819 746 aa17.4■□□□□ 0.38
COL7A1-209ENST00000474432 ZNF766Q5HY98 468 aa17.4■□□□□ 0.38
COL7A1-209ENST00000474432 ZNF468Q5VIY5 522 aaPredicted RBP17.4■□□□□ 0.38
COL7A1-209ENST00000474432 CMC1Q7Z7K0 106 aa17.4■□□□□ 0.38
COL7A1-209ENST00000474432 ZNF227Q86WZ6 799 aa17.4■□□□□ 0.38
COL7A1-209ENST00000474432 TCAIMQ8N3R3 496 aa17.4■□□□□ 0.38
COL7A1-209ENST00000474432 TMEM52Q8NDY8 209 aa17.4■□□□□ 0.38
COL7A1-209ENST00000474432 DNAJB8Q8NHS0 232 aa17.4■□□□□ 0.38
COL7A1-209ENST00000474432 FBF1Q8TES7 1133 aa17.4■□□□□ 0.38
COL7A1-209ENST00000474432 GAL3ST3Q96A11 431 aa17.4■□□□□ 0.38
COL7A1-209ENST00000474432 SCMH1Q96GD3 660 aa17.4■□□□□ 0.38
COL7A1-209ENST00000474432 EHD1Q9H4M9 534 aa17.4■□□□□ 0.38
COL7A1-209ENST00000474432 PRDM9Q9NQV7 894 aa17.4■□□□□ 0.38
COL7A1-209ENST00000474432 DNAJC11Q9NVH1 559 aa17.4■□□□□ 0.38
COL7A1-209ENST00000474432 ANKRD10Q9NXR5 420 aa17.4■□□□□ 0.38
COL7A1-209ENST00000474432 PCDHGB6Q9Y5F9 930 aa17.4■□□□□ 0.38
COL7A1-209ENST00000474432 H2AFYO75367 372 aaKnown RBP17.39■□□□□ 0.37
COL7A1-209ENST00000474432 STK16O75716 305 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 NEURL1O76050 574 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 CAV1Q03135 178 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 DOC2AQ14183 400 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 EFTUD2Q15029 972 aaKnown RBP eCLIP17.39■□□□□ 0.37
COL7A1-209ENST00000474432 GRTP1Q5TC63 336 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 ZNF787Q6DD87 383 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 SPINK14Q6IE38 97 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 SULT1C3Q6IMI6 304 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 ISCA2Q86U28 154 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 SCUBE1Q8IWY4 988 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 CTAGE3PQ8IX95 158 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 LGI4Q8N135 537 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 PPM1NQ8N819 430 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 RELTQ969Z4 430 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 RHBGQ9H310 441 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 CDCP1Q9H5V8 836 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 ZDHHC18Q9NUE0 388 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 WWOXQ9NZC7 414 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 UTP11Q9Y3A2 253 aaKnown RBP17.39■□□□□ 0.37
COL7A1-209ENST00000474432 CELSR2Q9HCU4 2923 aa17.39■□□□□ 0.37
COL7A1-209ENST00000474432 HMX2A2RU54 273 aa17.38■□□□□ 0.37
COL7A1-209ENST00000474432 SAGE2PA6NJ88 616 aa17.38■□□□□ 0.37
COL7A1-209ENST00000474432 GABRR3A8MPY1 467 aa17.38■□□□□ 0.37
COL7A1-209ENST00000474432 CLEC3AO75596 197 aa17.38■□□□□ 0.37
COL7A1-209ENST00000474432 SPRP35270 261 aaPredicted RBP17.38■□□□□ 0.37
COL7A1-209ENST00000474432 STXBP1P61764 594 aaKnown RBP17.38■□□□□ 0.37
COL7A1-209ENST00000474432 OR1C1Q15619 314 aa17.38■□□□□ 0.37
COL7A1-209ENST00000474432 UBAP2Q5T6F2 1119 aaKnown RBP17.38■□□□□ 0.37
COL7A1-209ENST00000474432 C1QL3Q5VWW1 255 aa17.38■□□□□ 0.37
COL7A1-209ENST00000474432 CCDC25Q86WR0 208 aa17.38■□□□□ 0.37
COL7A1-209ENST00000474432 RPS19BP1Q86WX3 136 aaKnown RBP17.38■□□□□ 0.37
COL7A1-209ENST00000474432 ARMC10Q8N2F6 343 aa17.38■□□□□ 0.37
COL7A1-209ENST00000474432 SLC5A8Q8N695 610 aa17.38■□□□□ 0.37
COL7A1-209ENST00000474432 TTLQ8NG68 377 aa17.38■□□□□ 0.37
COL7A1-209ENST00000474432 SEC16BQ96JE7 1060 aa17.38■□□□□ 0.37
COL7A1-209ENST00000474432 ATOH8Q96SQ7 321 aa17.38■□□□□ 0.37
COL7A1-209ENST00000474432 NPLQ9BXD5 320 aaPredicted RBP17.38■□□□□ 0.37
COL7A1-209ENST00000474432 CAPS2Q9BXY5 557 aa17.38■□□□□ 0.37
COL7A1-209ENST00000474432 PITHD1Q9GZP4 211 aaPredicted RBP17.38■□□□□ 0.37
COL7A1-209ENST00000474432 RAB17Q9H0T7 212 aa17.38■□□□□ 0.37
COL7A1-209ENST00000474432 IGSF5Q9NSI5 407 aa17.38■□□□□ 0.37
COL7A1-209ENST00000474432 TXNDC16Q9P2K2 825 aa17.38■□□□□ 0.37
COL7A1-209ENST00000474432 CRYBG3Q68DQ2 2970 aa17.38■□□□□ 0.37
COL7A1-209ENST00000474432 ESYT3A0FGR9 886 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 ASPDHA6ND91 283 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 ERI3O43414 337 aaKnown RBP17.37■□□□□ 0.37
COL7A1-209ENST00000474432 ZG16O60844 167 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 CRYABP02511 175 aaKnown RBP17.37■□□□□ 0.37
COL7A1-209ENST00000474432 GSTM2P28161 218 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 TPP2P29144 1249 aaPredicted RBP17.37■□□□□ 0.37
COL7A1-209ENST00000474432 PPP2R1BP30154 601 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 DCTP40126 519 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 GPR143P51810 404 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 SLC7A5Q01650 507 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 ZRSR2Q15696 482 aaKnown RBP17.37■□□□□ 0.37
COL7A1-209ENST00000474432 ABHD17CQ6PCB6 329 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 GFRALQ6UXV0 394 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 UBE3DQ7Z6J8 389 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 CYP4X1Q8N118 509 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 KRT78Q8N1N4 520 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 APCDD1LQ8NCL9 501 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 OR2L5Q8NG80 312 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 SUN3Q8TAQ9 357 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 UTP23Q9BRU9 249 aaKnown RBP17.37■□□□□ 0.37
COL7A1-209ENST00000474432 CD244Q9BZW8 370 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 ALG9Q9H6U8 611 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 TRIM45Q9H8W5 580 aaPredicted RBP17.37■□□□□ 0.37
COL7A1-209ENST00000474432 CNOT10Q9H9A5 744 aaKnown RBP17.37■□□□□ 0.37
COL7A1-209ENST00000474432 PRDM7Q9NQW5 492 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 CD274Q9NZQ7 290 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 ZNF223Q9UK11 482 aaPredicted RBP17.37■□□□□ 0.37
COL7A1-209ENST00000474432 MMACHCQ9Y4U1 282 aa17.37■□□□□ 0.37
COL7A1-209ENST00000474432 A8MUA0 341 aa17.36■□□□□ 0.37
COL7A1-209ENST00000474432 CYR61O00622 381 aa17.36■□□□□ 0.37
COL7A1-209ENST00000474432 UNC5CO95185 931 aa17.36■□□□□ 0.37
COL7A1-209ENST00000474432 MTHFD2P13995 350 aa17.36■□□□□ 0.37
COL7A1-209ENST00000474432 TFEBP19484 476 aa17.36■□□□□ 0.37
COL7A1-209ENST00000474432 CASP2P42575 452 aa17.36■□□□□ 0.37
COL7A1-209ENST00000474432 MLF1P58340 268 aa17.36■□□□□ 0.37
COL7A1-209ENST00000474432 PDK4Q16654 411 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms