RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 TYK2P29597 1187 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 OR4D2P58180 307 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 ZNF33BQ06732 778 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 ACTN3Q08043 901 aaPredicted RBP16.85■□□□□ 0.29
UPF3A-203ENST00000474056 E2F2Q14209 437 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 FAM83EQ2M2I3 478 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 ADPRMQ3LIE5 342 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 CCDC91Q7Z6B0 441 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 OR1N1Q8NGS0 311 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 RHEBL1Q8TAI7 183 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 HAS2Q92819 552 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 SEC16BQ96JE7 1060 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 FAR2Q96K12 515 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 PTCHD1Q96NR3 888 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 GPR78Q96P69 363 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 PAFAH2Q99487 392 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 LPAR4Q99677 370 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 BARD1Q99728 777 aaKnown RBP16.85■□□□□ 0.29
UPF3A-203ENST00000474056 EFCAB11Q9BUY7 163 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 REXO4Q9GZR2 422 aaKnown RBP16.85■□□□□ 0.29
UPF3A-203ENST00000474056 OPTCQ9UBM4 332 aa16.85■□□□□ 0.29
UPF3A-203ENST00000474056 SYCE1LA8MT33 242 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 K7EPI3 171 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 PSMD12O00232 456 aaPredicted RBP16.84■□□□□ 0.29
UPF3A-203ENST00000474056 PRMT3O60678 531 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 INHBAP08476 426 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 MAOAP21397 527 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 CASP2P42575 452 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 TNFSF10P50591 281 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 PLA2G16P53816 162 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 LAPTM5Q13571 262 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 RUNX2Q13950 521 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 ACAP2Q15057 778 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 TBCCQ15814 346 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 EXT1Q16394 746 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 EIF2S3LQ2VIR3 472 aaKnown RBP16.84■□□□□ 0.29
UPF3A-203ENST00000474056 ABHD17BQ5VST6 288 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 FCRLBQ6BAA4 426 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 PLD6Q8N2A8 252 aaKnown RBP16.84■□□□□ 0.29
UPF3A-203ENST00000474056 CEP112Q8N8E3 955 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 OR2L5Q8NG80 312 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 UHMK1Q8TAS1 419 aaKnown RBP16.84■□□□□ 0.29
UPF3A-203ENST00000474056 M1APQ8TC57 530 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 QRFPRQ96P65 431 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 NPAS2Q99743 824 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 VPS11Q9H270 941 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 KCNK13Q9HB14 408 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 NECTIN3Q9NQS3 549 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 ZNF358Q9NW07 568 aa16.84■□□□□ 0.29
UPF3A-203ENST00000474056 SPTBN1Q01082 2364 aaKnown RBP16.84■□□□□ 0.29
UPF3A-203ENST00000474056 IGKV3D-11A0A0A0MRZ8 115 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 LRRC14BA6NHZ5 514 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 A8MUI8 341 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 CBX6O95503 412 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 CERS1P27544 350 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 MSH2P43246 934 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 MAGEA12P43365 314 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 RAB38P57729 211 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 SLC26A5P58743 744 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 SETDB1Q15047 1291 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 HIST2H2ACQ16777 129 aaPredicted RBP16.83■□□□□ 0.28
UPF3A-203ENST00000474056 PAGE2BQ5JRK9 111 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 FHL5Q5TD97 284 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 HIST2H2AA3Q6FI13 130 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 H3F3CQ6NXT2 135 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 TRIM40Q6P9F5 258 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 TMEM52Q8NDY8 209 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 GRHL3Q8TE85 626 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 ISL2Q96A47 359 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 TRIM44Q96DX7 344 aaPredicted RBP16.83■□□□□ 0.28
UPF3A-203ENST00000474056 NPLQ9BXD5 320 aaPredicted RBP16.83■□□□□ 0.28
UPF3A-203ENST00000474056 RNF32Q9H0A6 362 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.83■□□□□ 0.28
UPF3A-203ENST00000474056 MMP25Q9NPA2 562 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 PRDM9Q9NQV7 894 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 STMN3Q9NZ72 180 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 NFU1Q9UMS0 254 aa16.83■□□□□ 0.28
UPF3A-203ENST00000474056 SPTAN1Q13813 2472 aaKnown RBP16.82■□□□□ 0.28
UPF3A-203ENST00000474056 DIDO1Q9BTC0 2240 aaKnown RBP16.82■□□□□ 0.28
UPF3A-203ENST00000474056 A0A088AWK7 358 aa16.82■□□□□ 0.28
UPF3A-203ENST00000474056 TRAV17A0A0B4J275 112 aa16.82■□□□□ 0.28
UPF3A-203ENST00000474056 TCRBV16S1A1N1A0A5B0 115 aa16.82■□□□□ 0.28
UPF3A-203ENST00000474056 POC1B-GALNT4F8VUJ3 575 aa16.82■□□□□ 0.28
UPF3A-203ENST00000474056 MAN1A2O60476 641 aa16.82■□□□□ 0.28
UPF3A-203ENST00000474056 GFAPP14136 432 aa16.82■□□□□ 0.28
UPF3A-203ENST00000474056 ZNF10P21506 573 aaPredicted RBP16.82■□□□□ 0.28
UPF3A-203ENST00000474056 ST13P50502 369 aaKnown RBP16.82■□□□□ 0.28
UPF3A-203ENST00000474056 HNRNPFP52597 415 aaKnown RBP16.82■□□□□ 0.28
UPF3A-203ENST00000474056 NAA30Q147X3 362 aaPredicted RBP16.82■□□□□ 0.28
UPF3A-203ENST00000474056 PFKFB4Q16877 469 aa16.82■□□□□ 0.28
UPF3A-203ENST00000474056 TECRLQ5HYJ1 363 aa16.82■□□□□ 0.28
UPF3A-203ENST00000474056 RPUSD3Q6P087 351 aaKnown RBP16.82■□□□□ 0.28
UPF3A-203ENST00000474056 KLC3Q6P597 504 aa16.82■□□□□ 0.28
UPF3A-203ENST00000474056 ABHD17CQ6PCB6 329 aa16.82■□□□□ 0.28
UPF3A-203ENST00000474056 CRLF3Q8IUI8 442 aa16.82■□□□□ 0.28
UPF3A-203ENST00000474056 CYP4X1Q8N118 509 aa16.82■□□□□ 0.28
UPF3A-203ENST00000474056 BEST3Q8N1M1 668 aa16.82■□□□□ 0.28
UPF3A-203ENST00000474056 TEX9Q8N6V9 391 aa16.82■□□□□ 0.28
UPF3A-203ENST00000474056 ZNF473Q8WTR7 871 aaKnown RBP16.82■□□□□ 0.28
UPF3A-203ENST00000474056 DCAKDQ8WVC6 231 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms