RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 THAP1Q9NVV9 213 aa5.04□□□□□ -1.6
FN1-219ENST00000474036 THAP10Q9P2Z0 257 aaPredicted RBP5.04□□□□□ -1.6
FN1-219ENST00000474036 DKK3Q9UBP4 350 aa5.04□□□□□ -1.6
FN1-219ENST00000474036 NKX1-2Q9UD57 310 aaPredicted RBP5.04□□□□□ -1.6
FN1-219ENST00000474036 PISDQ9UG56 409 aa5.04□□□□□ -1.6
FN1-219ENST00000474036 DCDC2Q9UHG0 476 aa5.04□□□□□ -1.6
FN1-219ENST00000474036 IPO11Q9UI26 975 aaKnown RBP5.04□□□□□ -1.6
FN1-219ENST00000474036 ANAPC2Q9UJX6 822 aa5.04□□□□□ -1.6
FN1-219ENST00000474036 LSM7Q9UK45 103 aaKnown RBP5.04□□□□□ -1.6
FN1-219ENST00000474036 VPS4AQ9UN37 437 aa5.04□□□□□ -1.6
FN1-219ENST00000474036 NCKAP1Q9Y2A7 1128 aa5.04□□□□□ -1.6
FN1-219ENST00000474036 L3MBTL1Q9Y468 752 aa5.04□□□□□ -1.6
FN1-219ENST00000474036 PCDHGB6Q9Y5F9 930 aa5.04□□□□□ -1.6
FN1-219ENST00000474036 ENTPD2Q9Y5L3 495 aa5.04□□□□□ -1.6
FN1-219ENST00000474036 HIVEP1P15822 2718 aa5.04□□□□□ -1.6
FN1-219ENST00000474036 MDC1Q14676 2089 aaKnown RBP5.04□□□□□ -1.6
FN1-219ENST00000474036 SPG11Q96JI7 2443 aa5.04□□□□□ -1.6
FN1-219ENST00000474036 APCP25054 2843 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 A0A087WWL8 130 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 MAGEB16A2A368 324 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 DNAJC9-AS1A6NH13 148 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 TMEM233B4DJY2 109 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 H0Y3Z8 333 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 J3KR12 359 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 AP3B1O00203 1094 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 CCL22O00626 93 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 TRAFD1O14545 582 aaPredicted RBP5.03□□□□□ -1.6
FN1-219ENST00000474036 PPM1DO15297 605 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 GYG2O15488 501 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 HNRNPCL1O60812 293 aaKnown RBP5.03□□□□□ -1.6
FN1-219ENST00000474036 CCDC22O60826 627 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 PEX11AO75192 247 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 RNASEH2AO75792 299 aaKnown RBP5.03□□□□□ -1.6
FN1-219ENST00000474036 CLDN1O95832 211 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 OLFM2O95897 454 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 IGLV3-19P01714 112 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 C2P06681 752 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 CISD3P0C7P0 127 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 SLC2A3P11169 496 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 CALB2P22676 271 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 SLC7A1P30825 629 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 ARRB2P32121 409 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 ADRA1AP35348 466 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 PGM1P36871 562 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 CD86P42081 329 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 MAGEA11P43364 429 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 MAGEA12P43365 314 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 CD151P48509 253 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 RASSF2P50749 326 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 KRTAP10-9P60411 292 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 MAXP61244 160 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 RPS14P62263 151 aaKnown RBP5.03□□□□□ -1.6
FN1-219ENST00000474036 EIF4EBP2Q13542 120 aaPredicted RBP5.03□□□□□ -1.6
FN1-219ENST00000474036 INSCQ1MX18 579 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 CCDC153Q494R4 210 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 ALFQ53S48 1182 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 MS4A13Q5J8X5 152 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 CFAP157Q5JU67 520 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 WASHC2DQ5SRD0 308 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 HECTD3Q5T447 861 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 VWA5B1Q5TIE3 1220 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 RNF220Q5VTB9 566 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 KDELC1Q6UW63 502 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 ZYG11AQ6WRX3 759 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 NAPRTQ6XQN6 538 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 ZNF783Q6ZMS7 281 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 RBM44Q6ZP01 1051 aaKnown RBP5.03□□□□□ -1.6
FN1-219ENST00000474036 EFL1Q7Z2Z2 1120 aaKnown RBP5.03□□□□□ -1.6
FN1-219ENST00000474036 MAVSQ7Z434 540 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 TMEM135Q86UB9 458 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 ZC3HC1Q86WB0 502 aaKnown RBP5.03□□□□□ -1.6
FN1-219ENST00000474036 HEATR4Q86WZ0 1026 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 ZFAND4Q86XD8 727 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 TICAM1Q8IUC6 712 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 DENND6AQ8IWF6 608 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 LGI2Q8N0V4 545 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 SPATA6LQ8N4H0 392 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 TEX9Q8N6V9 391 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.03□□□□□ -1.6
FN1-219ENST00000474036 GPATCH11Q8N954 259 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 WDR36Q8NI36 951 aaKnown RBP5.03□□□□□ -1.6
FN1-219ENST00000474036 AGR3Q8TD06 166 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 NSMCE1Q8WV22 266 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 RFKQ969G6 155 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 MCUR1Q96AQ8 359 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 RPRD1AQ96P16 312 aaPredicted RBP5.03□□□□□ -1.6
FN1-219ENST00000474036 NUDCD1Q96RS6 583 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 SORT1Q99523 831 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 OMDQ99983 421 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 BTBD10Q9BSF8 475 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 FSD1LQ9BXM9 530 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.03□□□□□ -1.6
FN1-219ENST00000474036 SHCBP1LQ9BZQ2 653 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 ZYG11BQ9C0D3 744 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 RHOJQ9H4E5 214 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 FBXO44Q9H4M3 255 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 DENND2DQ9H6A0 471 aaPredicted RBP5.03□□□□□ -1.6
FN1-219ENST00000474036 FBXL12Q9NXK8 326 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 NSMCE4AQ9NXX6 385 aa5.03□□□□□ -1.6
FN1-219ENST00000474036 CPSF2Q9P2I0 782 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms