RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 TPM4P67936 248 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 MPP1Q00013 466 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 SETQ01105 290 aaPredicted RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 UBXN1Q04323 297 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 LGALS3BPQ08380 585 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 IKQ13123 557 aaPredicted RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 PPP2R5CQ13362 524 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 UBE2V1Q13404 147 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 GIT2Q14161 759 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 TNIP1Q15025 636 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 MEA1Q16626 185 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 TSTQ16762 297 aaKnown RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 TMEM266Q2M3C6 531 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 CBWD6Q4V339 395 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 CEP55Q53EZ4 464 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 CBWD3Q5JTY5 395 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 C1orf220Q5T0J3 134 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 LYSMD4Q5XG99 296 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 KRT79Q5XKE5 535 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 HAUS3Q68CZ6 603 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 SNRNP48Q6IEG0 339 aaKnown RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 SLC39A4Q6P5W5 647 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 CORO6Q6QEF8 472 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 SYT10Q6XYQ8 523 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 DENND5BQ6ZUT9 1274 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 C1orf186Q6ZWK4 172 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 R3HCC1LQ7Z5L2 792 aaKnown RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 DNAAF5Q86Y56 855 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 ARMC8Q8IUR7 673 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 CCDC60Q8IWA6 550 aaPredicted RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 NELFCDQ8IXH7 590 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 PRR22Q8IZ63 422 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 SCYL3Q8IZE3 742 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 MYOCDQ8IZQ8 938 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 GPC2Q8N158 579 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 SLC35F6Q8N357 371 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 GUF1Q8N442 669 aaKnown RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 CSGALNACT2Q8N6G5 542 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 SYT2Q8N9I0 419 aaPredicted RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 L3MBTL4Q8NA19 623 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 CCDC112Q8NEF3 446 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 KBTBD8Q8NFY9 601 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 OR8K5Q8NH50 307 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 NFKBIDQ8NI38 313 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 METTL6Q8TCB7 284 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 PERPQ96FX8 193 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 CALML4Q96GE6 196 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 PANX2Q96RD6 677 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 TAAR1Q96RJ0 339 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 ERGIC2Q96RQ1 377 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 BAG1Q99933 345 aaPredicted RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 HSD17B14Q9BPX1 270 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 LXNQ9BS40 222 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 TUBGCP2Q9BSJ2 902 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF577Q9BSK1 485 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 KIFC3Q9BVG8 833 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 STRA6Q9BX79 667 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 TEKT3Q9BXF9 490 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 GPR88Q9GZN0 384 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 CUEDC2Q9H467 287 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 THAP9Q9H5L6 903 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 SH2D4AQ9H788 454 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 MED20Q9H944 212 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 RANGRFQ9HD47 186 aaPredicted RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 TUFT1Q9NNX1 390 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 XPNPEP1Q9NQW7 623 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 PXMP2Q9NR77 195 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 PANK4Q9NVE7 773 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 RMND1Q9NWS8 449 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF446Q9NWS9 450 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 RCC2Q9P258 522 aaKnown RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 HOOK1Q9UJC3 728 aaKnown RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF215Q9UL58 517 aaPredicted RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 CCPG1Q9ULG6 757 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 NENFQ9UMX5 172 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 R3HDM2Q9Y2K5 976 aaKnown RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 PPP2R2CQ9Y2T4 447 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 UBIAD1Q9Y5Z9 338 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 PCM1Q15154 2024 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 FREM2Q5SZK8 3169 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 UBE4BO95155 1302 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 PTPRJQ12913 1337 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 GON4LQ3T8J9 2241 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 PLXNA2O75051 1894 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 DENND4AQ7Z401 1863 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 CUL9Q8IWT3 2517 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 PLXND1Q9Y4D7 1925 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 TTC28Q96AY4 2481 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 MDC1Q14676 2089 aaKnown RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 PVALEFA0A1B0GWK0 134 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 A0A1W2PPH5 198 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 FAM170AA1A519 330 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 BICDL2A1A5D9 508 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 OR2M5A3KFT3 312 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 ARHGEF35A5YM69 484 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 J3QR06 171 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 K7ENM7 598 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 PES1O00541 588 aaKnown RBP1.37□□□□□ -2.19
CCDC39-203ENST00000473854 DYNC1I1O14576 645 aa1.37□□□□□ -2.19
CCDC39-203ENST00000473854 STX10O60499 249 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms