RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 ITGA3P26006 1051 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 PTGER4P35408 488 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 RAB28P51157 221 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 COPB1P53618 953 aaKnown RBP6.53□□□□□ -1.36
SCAF4-205ENST00000472318 SNU13P55769 128 aaKnown RBP6.53□□□□□ -1.36
SCAF4-205ENST00000472318 NME5P56597 212 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 GABPB1Q06547 395 aaPredicted RBP6.53□□□□□ -1.36
SCAF4-205ENST00000472318 THOC5Q13769 683 aaKnown RBP6.53□□□□□ -1.36
SCAF4-205ENST00000472318 ZNF273Q14593 569 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 SHEQ5VZ18 495 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 VWA1Q6PCB0 445 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 RFWD3Q6PCD5 774 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 LINGO4Q6UY18 593 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 CLEC20AQ6ZU45 233 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 PTCHD4Q6ZW05 846 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 MARK2Q7KZI7 788 aaKnown RBP6.53□□□□□ -1.36
SCAF4-205ENST00000472318 TRAPPC11Q7Z392 1133 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 ACOT1Q86TX2 421 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 SFTPA2Q8IWL1 248 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 KLHL7Q8IXQ5 586 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 SFRP1Q8N474 314 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 C12orf29Q8N999 325 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 DRAXINQ8NBI3 349 aaPredicted RBP6.53□□□□□ -1.36
SCAF4-205ENST00000472318 CAMKVQ8NCB2 501 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 SPATA3Q8NHX4 192 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 ART4Q93070 314 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 RAB7BQ96AH8 199 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 REXO5Q96IC2 774 aaKnown RBP6.53□□□□□ -1.36
SCAF4-205ENST00000472318 ANKRD36BP1Q96IX9 119 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 SDCBP2Q9H190 292 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 SMYD3Q9H7B4 428 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 RDH14Q9HBH5 336 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 PARVGQ9HBI0 331 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 TCF7L2Q9NQB0 619 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 ARHGEF38Q9NXL2 777 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 CNIH4Q9P003 139 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 FBXL17Q9UF56 701 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 IPO11Q9UI26 975 aaKnown RBP6.53□□□□□ -1.36
SCAF4-205ENST00000472318 PADI1Q9ULC6 663 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 JMJD1CQ15652 2540 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 ZNF106Q9H2Y7 1883 aaKnown RBP6.53□□□□□ -1.36
SCAF4-205ENST00000472318 MYH10P35580 1976 aa6.53□□□□□ -1.36
SCAF4-205ENST00000472318 TDRD6O60522 2096 aaKnown RBP6.53□□□□□ -1.36
SCAF4-205ENST00000472318 ACANP16112 2415 aa6.52□□□□□ -1.36
SCAF4-205ENST00000472318 ANKUB1A6NFN9 424 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 LRRC3CA6NJW4 275 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 A6NL46 340 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 ADAMDEC1O15204 470 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 PAK4O96013 591 aaPredicted RBP6.52□□□□□ -1.37
SCAF4-205ENST00000472318 RALAP11233 206 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 ZFXP17010 805 aaPredicted RBP6.52□□□□□ -1.37
SCAF4-205ENST00000472318 ZNF8P17098 575 aaPredicted RBP6.52□□□□□ -1.37
SCAF4-205ENST00000472318 ADORA2BP29275 332 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 MC5RP33032 325 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 SOAT1P35610 550 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 ZNF135P52742 658 aaPredicted RBP6.52□□□□□ -1.37
SCAF4-205ENST00000472318 PMS2P54278 862 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 ECT2LQ008S8 904 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 CBFBQ13951 182 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 IL11RAQ14626 422 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 GSTA3Q16772 222 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 P3H1Q32P28 736 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 IGSF11Q5DX21 431 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 NEK5Q6P3R8 708 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 MFSD7Q6UXD7 560 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 TAF8Q7Z7C8 310 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 CLNKQ7Z7G1 428 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 TADA2BQ86TJ2 420 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 MFN1Q8IWA4 741 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 APCDD1Q8J025 514 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 MCUQ8NE86 351 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 FAM46DQ8NEK8 389 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 OR6C4Q8NGE1 309 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 SLC2A12Q8TD20 617 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 ST7LQ8TDW4 575 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 KIAA1143Q96AT1 154 aaPredicted RBP6.52□□□□□ -1.37
SCAF4-205ENST00000472318 PTERQ96BW5 349 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 SNRNP40Q96DI7 357 aaKnown RBP6.52□□□□□ -1.37
SCAF4-205ENST00000472318 KLHL15Q96M94 604 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 HAPLN3Q96S86 360 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 MESP1Q9BRJ9 268 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 CBWD1Q9BRT8 395 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 PIMREGQ9BSJ6 248 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 DDA1Q9BW61 102 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 FAM49BQ9NUQ9 324 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 ASF1BQ9NVP2 202 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 OCIAD1Q9NX40 245 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 VSX1Q9NZR4 365 aaPredicted RBP6.52□□□□□ -1.37
SCAF4-205ENST00000472318 JKAMPQ9P055 326 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 CTTNBP2NLQ9P2B4 639 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 RCOR3Q9P2K3 495 aaPredicted RBP6.52□□□□□ -1.37
SCAF4-205ENST00000472318 DNAJB11Q9UBS4 358 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 HMGXB4Q9UGU5 601 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.52□□□□□ -1.37
SCAF4-205ENST00000472318 CUBNO60494 3623 aa6.52□□□□□ -1.37
SCAF4-205ENST00000472318 FN1P02751 2386 aaKnown RBP6.52□□□□□ -1.37
SCAF4-205ENST00000472318 IGHV5-10-1A0A0J9YXX1 117 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 HTR3EA5X5Y0 456 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 OOEPA6NGQ2 149 aa6.51□□□□□ -1.37
SCAF4-205ENST00000472318 RASGRF2O14827 1237 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms