RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ALDH6A1Q02252 535 aaKnown RBP21.1■□□□□ 0.97
C9orf3-213ENST00000471978 ZNF468Q5VIY5 522 aaPredicted RBP21.1■□□□□ 0.97
C9orf3-213ENST00000471978 KRT78Q8N1N4 520 aa21.1■□□□□ 0.97
C9orf3-213ENST00000471978 TCAIMQ8N3R3 496 aa21.1■□□□□ 0.97
C9orf3-213ENST00000471978 NFAM1Q8NET5 270 aaPredicted RBP21.1■□□□□ 0.97
C9orf3-213ENST00000471978 ITLN2Q8WWU7 325 aaPredicted RBP21.1■□□□□ 0.97
C9orf3-213ENST00000471978 GPR137Q96N19 417 aa21.1■□□□□ 0.97
C9orf3-213ENST00000471978 TSPAN10Q9H1Z9 355 aaPredicted RBP21.1■□□□□ 0.97
C9orf3-213ENST00000471978 WWOXQ9NZC7 414 aa21.1■□□□□ 0.97
C9orf3-213ENST00000471978 A0A0G2JN53 185 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 ARHGAP10A1A4S6 786 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 LRIT2A6NDA9 550 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 FAM187AA6NFU0 413 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 TAPBPO15533 448 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 PHGDHO43175 533 aaKnown RBP21.09■□□□□ 0.97
C9orf3-213ENST00000471978 ERI3O43414 337 aaKnown RBP21.09■□□□□ 0.97
C9orf3-213ENST00000471978 CCDC166P0CW27 439 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 HNRNPH1P31943 449 aaKnown RBP21.09■□□□□ 0.97
C9orf3-213ENST00000471978 MAPKAPK3Q16644 382 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 KRTCAP3Q53RY4 240 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 MTFR2Q6P444 385 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.09■□□□□ 0.97
C9orf3-213ENST00000471978 GPSM1Q86YR5 675 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 FAM98AQ8NCA5 519 aaKnown RBP21.09■□□□□ 0.97
C9orf3-213ENST00000471978 THAP3Q8WTV1 239 aaPredicted RBP21.09■□□□□ 0.97
C9orf3-213ENST00000471978 MARVELD3Q96A59 401 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 MS4A6EQ96DS6 147 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 FRMD6Q96NE9 622 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 CPNE1Q99829 537 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 TMEM79Q9BSE2 394 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 DEFB126Q9BYW3 111 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 CNOT10Q9H9A5 744 aaKnown RBP21.09■□□□□ 0.97
C9orf3-213ENST00000471978 DNAJC11Q9NVH1 559 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 GPRC5BQ9NZH0 403 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 MMACHCQ9Y4U1 282 aa21.09■□□□□ 0.97
C9orf3-213ENST00000471978 ABCA12Q86UK0 2595 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 TCRBV9S1A1TA0A576 114 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 NPIPA5E9PKD4 350 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 EIF3HO15372 352 aaKnown RBP eCLIP21.08■□□□□ 0.97
C9orf3-213ENST00000471978 HNRNPRO43390 633 aaKnown RBP21.08■□□□□ 0.97
C9orf3-213ENST00000471978 SLC25A12O75746 678 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 GSTM2P28161 218 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 GGT5P36269 586 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 CYB561P49447 251 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 MLF1P58340 268 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 ART3Q13508 389 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 RUNX2Q13950 521 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 FBXO48Q5FWF7 155 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 MAATS1Q7Z4T9 603 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 MRGPRGQ86SM5 289 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 TICAM1Q8IUC6 712 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 SPATA4Q8NEY3 305 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 SEC16BQ96JE7 1060 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 MAGED4Q96JG8 741 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 PDLIM2Q96JY6 352 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 RBBP8Q99708 897 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 NPLQ9BXD5 320 aaPredicted RBP21.08■□□□□ 0.97
C9orf3-213ENST00000471978 PITHD1Q9GZP4 211 aaPredicted RBP21.08■□□□□ 0.97
C9orf3-213ENST00000471978 NT5DC2Q9H857 520 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 NPIPA1Q9UND3 350 aa21.08■□□□□ 0.97
C9orf3-213ENST00000471978 APCP25054 2843 aa21.08■□□□□ 0.96
C9orf3-213ENST00000471978 A0A088AWK7 358 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 ANKDD1BA6NHY2 528 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 CLGNO14967 610 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 RAD51CO43502 376 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 CLEC3AO75596 197 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 MYO1DO94832 1006 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 CD1DP15813 335 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 STMN1P16949 149 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 ZNF10P21506 573 aaPredicted RBP21.07■□□□□ 0.96
C9orf3-213ENST00000471978 HSPA7P48741 367 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 ATP6V0D1P61421 351 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 OR4D1Q15615 310 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 C3AR1Q16581 482 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 CDKL4Q5MAI5 379 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 SULT1C3Q6IMI6 304 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 C3orf62Q6ZUJ4 267 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 CYS1Q717R9 158 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 SNX31Q8N9S9 440 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 B3GNT7Q8NFL0 401 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 ESAMQ96AP7 390 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 GPR22Q99680 433 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 EHD1Q9H4M9 534 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 TRIM45Q9H8W5 580 aaPredicted RBP21.07■□□□□ 0.96
C9orf3-213ENST00000471978 PNO1Q9NRX1 252 aaKnown RBP21.07■□□□□ 0.96
C9orf3-213ENST00000471978 CD274Q9NZQ7 290 aa21.07■□□□□ 0.96
C9orf3-213ENST00000471978 TRBV11-1A0A0K0K1C0 115 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 FAM159BA6NKW6 160 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 FCHO1O14526 889 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 B3GALT2O43825 422 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 NME2P1O60361 137 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 STK16O75716 305 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 NME2P22392 152 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 HPDP32754 393 aaPredicted RBP21.06■□□□□ 0.96
C9orf3-213ENST00000471978 TRHRP34981 398 aaPredicted RBP21.06■□□□□ 0.96
C9orf3-213ENST00000471978 GP5P40197 560 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 HLCSP50747 726 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 PLA2G16P53816 162 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 XKR6Q5GH73 641 aa21.06■□□□□ 0.96
C9orf3-213ENST00000471978 RPTNQ6XPR3 784 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms