RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 IGSF10Q6WRI0 2623 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 A0A1W2PQ72 361 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 RGS16O15492 202 aaPredicted RBP14.43□□□□□ -0.1
SDC3-203ENST00000471567 B3GALT2O43825 422 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 JRKO75564 520 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 TGFB1P01137 390 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 FHP07954 510 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 FAM87AP0C7U9 286 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 RNH1P13489 461 aaKnown RBP14.43□□□□□ -0.1
SDC3-203ENST00000471567 JAK1P23458 1154 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 TSFMP43897 325 aaKnown RBP14.43□□□□□ -0.1
SDC3-203ENST00000471567 MTTPP55157 894 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 KCNAB2Q13303 367 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 SOWAHCQ53LP3 525 aaPredicted RBP14.43□□□□□ -0.1
SDC3-203ENST00000471567 DCAF10Q5QP82 559 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 BEND6Q5SZJ8 279 aaPredicted RBP14.43□□□□□ -0.1
SDC3-203ENST00000471567 KHDRBS2Q5VWX1 349 aaKnown RBP14.43□□□□□ -0.1
SDC3-203ENST00000471567 FRG2Q64ET8 278 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 TMEM205Q6UW68 189 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 KIRREL2Q6UWL6 708 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 RPS27LQ71UM5 84 aaKnown RBP14.43□□□□□ -0.1
SDC3-203ENST00000471567 CCDC63Q8NA47 563 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 PLPP5Q8NEB5 264 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 ADAMTS18Q8TE60 1221 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 TRPC4APQ8TEL6 797 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 METTL21AQ8WXB1 218 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 SLC39A7Q92504 469 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 PEX11GQ96HA9 241 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 ZIM3Q96PE6 472 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 BBC3Q96PG8 261 aaPredicted RBP14.43□□□□□ -0.1
SDC3-203ENST00000471567 FRG2BQ96QU4 278 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 ZNF382Q96SR6 550 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 MTERF1Q99551 399 aaKnown RBP14.43□□□□□ -0.1
SDC3-203ENST00000471567 CENPKQ9BS16 269 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 VN1R1Q9GZP7 353 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 DMRT3Q9NQL9 472 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 PRDM7Q9NQW5 492 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 LANCL2Q9NS86 450 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 OXSMQ9NWU1 459 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 TRPS1Q9UHF7 1281 aa14.43□□□□□ -0.1
SDC3-203ENST00000471567 LOC102723996A0A087X1L8 192 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 MAGEB17A8MXT2 336 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 MKRN2OSH3BPM6 223 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 H3BQF6 201 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 PSMD12O00232 456 aaPredicted RBP14.42□□□□□ -0.1
SDC3-203ENST00000471567 PPP6CO00743 305 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 DNAJB6O75190 326 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 ALOX12BO75342 701 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 CEACAM4O75871 244 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 ACPPP15309 386 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 PKNOX1P55347 436 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 SOX8P57073 446 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 RPS13P62277 151 aaKnown RBP14.42□□□□□ -0.1
SDC3-203ENST00000471567 OLR1P78380 273 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 LCP2Q13094 533 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 IFT88Q13099 833 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 CUL3Q13618 768 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 DDX39BQ13838 428 aaKnown RBP14.42□□□□□ -0.1
SDC3-203ENST00000471567 RUNX2Q13950 521 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 LY6DQ14210 128 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 AP5B1Q2VPB7 878 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 MINDY4Q4G0A6 757 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 CEP85LQ5SZL2 805 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 CPZQ66K79 652 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 TTC19Q6DKK2 380 aaPredicted RBP14.42□□□□□ -0.1
SDC3-203ENST00000471567 LETMD1Q6P1Q0 360 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 UBE3DQ7Z6J8 389 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 CA13Q8N1Q1 262 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 CLEC1AQ8NC01 280 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 OR11G2Q8NGC1 345 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 RGMAQ96B86 450 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 TRIM55Q9BYV6 548 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 COPS7BQ9H9Q2 264 aaPredicted RBP14.42□□□□□ -0.1
SDC3-203ENST00000471567 ATP13A2Q9NQ11 1180 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 RRAGDQ9NQL2 400 aaPredicted RBP14.42□□□□□ -0.1
SDC3-203ENST00000471567 FBXL4Q9UKA2 621 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 SNX6Q9UNH7 406 aa14.42□□□□□ -0.1
SDC3-203ENST00000471567 A0A0G2JN53 185 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 A0A1B0GTL3 188 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 KLHL41O60662 606 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 SCELO95171 688 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 HPP00738 406 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 C8orf89P0DMQ9 161 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 TSPAN8P19075 237 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 CCL11P51671 97 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 NEK2P51955 445 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 RAB38P57729 211 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 ASPHQ12797 758 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 CHAF1BQ13112 559 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 AIMP2Q13155 320 aaKnown RBP14.41□□□□□ -0.1
SDC3-203ENST00000471567 RCN2Q14257 317 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 TNFAIP8L3Q5GJ75 292 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 MFSD4BQ5TF39 518 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 LIPMQ5VYY2 423 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 GPRIN3Q6ZVF9 776 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 NDUFAF7Q7L592 441 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 SHISA5Q8N114 240 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 CCNYL1Q8N7R7 359 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 ARMC2Q8NEN0 867 aa14.41□□□□□ -0.1
SDC3-203ENST00000471567 PGM2Q96G03 612 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms