RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 NVLO15381 856 aaKnown RBP16.69■□□□□ 0.26
HSPG2-208ENST00000471322 AKAP10O43572 662 aa16.69■□□□□ 0.26
HSPG2-208ENST00000471322 PRICKLE3O43900 615 aaPredicted RBP16.69■□□□□ 0.26
HSPG2-208ENST00000471322 EML2O95834 649 aa16.69■□□□□ 0.26
HSPG2-208ENST00000471322 CMPK1P30085 196 aa16.69■□□□□ 0.26
HSPG2-208ENST00000471322 CSNK1G2P78368 415 aa16.69■□□□□ 0.26
HSPG2-208ENST00000471322 ZNF763Q0D2J5 394 aa16.69■□□□□ 0.26
HSPG2-208ENST00000471322 MAP7Q14244 749 aa16.69■□□□□ 0.26
HSPG2-208ENST00000471322 FXNQ16595 210 aa16.69■□□□□ 0.26
HSPG2-208ENST00000471322 RUNDC3AQ59EK9 446 aa16.69■□□□□ 0.26
HSPG2-208ENST00000471322 CPTPQ5TA50 214 aa16.69■□□□□ 0.26
HSPG2-208ENST00000471322 DEPDC1Q5TB30 811 aa16.69■□□□□ 0.26
HSPG2-208ENST00000471322 ANXA8L1Q5VT79 327 aa16.69■□□□□ 0.26
HSPG2-208ENST00000471322 PAGE2Q7Z2X7 111 aa16.69■□□□□ 0.26
HSPG2-208ENST00000471322 R3HCC1LQ7Z5L2 792 aaKnown RBP16.69■□□□□ 0.26
HSPG2-208ENST00000471322 MARCH9Q86YJ5 346 aa16.69■□□□□ 0.26
HSPG2-208ENST00000471322 NRG4Q8WWG1 115 aa16.69■□□□□ 0.26
HSPG2-208ENST00000471322 GBP5Q96PP8 586 aa16.69■□□□□ 0.26
HSPG2-208ENST00000471322 TRBC2A0A5B9 178 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 RFXANKO14593 260 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 CKMT1AP12532 417 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 PSMB5P28074 263 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 SLC7A1P30825 629 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 MAZP56270 477 aaKnown RBP16.68■□□□□ 0.26
HSPG2-208ENST00000471322 PHC1P78364 1004 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 NR0B2Q15466 257 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 UGT8Q16880 541 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 MUM1Q2TAK8 710 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 KHDRBS2Q5VWX1 349 aaKnown RBP16.68■□□□□ 0.26
HSPG2-208ENST00000471322 IKBIPQ70UQ0 350 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 VN1R5Q7Z5H4 357 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 PQLC1Q8N2U9 271 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 ARL10Q8N8L6 244 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 FAM181AQ8N9Y4 354 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 ZDHHC1Q8WTX9 485 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 GFM2Q969S9 779 aaKnown RBP16.68■□□□□ 0.26
HSPG2-208ENST00000471322 COQ8BQ96D53 544 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 THUMPD3Q9BV44 507 aaKnown RBP16.68■□□□□ 0.26
HSPG2-208ENST00000471322 MS4A8Q9BY19 250 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 PAIP1Q9H074 479 aaKnown RBP16.68■□□□□ 0.26
HSPG2-208ENST00000471322 SERHLQ9NQF3 203 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 ATAD3AQ9NVI7 634 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 VAPAQ9P0L0 249 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 ZNF624Q9P2J8 865 aaPredicted RBP16.68■□□□□ 0.26
HSPG2-208ENST00000471322 ATP6V1HQ9UI12 483 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 SNX7Q9UNH6 387 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 PCDHB3Q9Y5E6 796 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 COL5A1P20908 1838 aaPredicted RBP16.68■□□□□ 0.26
HSPG2-208ENST00000471322 CHD8Q9HCK8 2581 aa16.68■□□□□ 0.26
HSPG2-208ENST00000471322 TRBV5-3A0A0A0MS03 114 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 PRSS51A0A1B0GVH4 220 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 HYAL3O43820 417 aaPredicted RBP16.67■□□□□ 0.26
HSPG2-208ENST00000471322 SH3BGRLO75368 114 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 GMNNO75496 209 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 CLEC3AO75596 197 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 DDX5P17844 614 aaKnown RBP16.67■□□□□ 0.26
HSPG2-208ENST00000471322 GSTM5P46439 218 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 SF1Q15637 639 aaKnown RBP16.67■□□□□ 0.26
HSPG2-208ENST00000471322 IYDQ6PHW0 289 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 ADCK2Q7Z695 626 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 SLC9B2Q86UD5 537 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 TRIM48Q8IWZ4 208 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 CDC26Q8NHZ8 85 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.67■□□□□ 0.26
HSPG2-208ENST00000471322 IFI44Q8TCB0 444 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 MTERF3Q96E29 417 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 NRTNQ99748 197 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 REXO4Q9GZR2 422 aaKnown RBP16.67■□□□□ 0.26
HSPG2-208ENST00000471322 SRMSQ9H3Y6 488 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 REEP4Q9H6H4 257 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 MYNNQ9NPC7 610 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 MAGEL2Q9UJ55 1249 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 PADI4Q9UM07 663 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 AP4S1Q9Y587 144 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 RP1P56715 2156 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 KIR2DS5A0A0G2JLQ3 304 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 A0A0G2JNG1 304 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 KIR2DS3K7RE56 304 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 CASQ2O14958 399 aaPredicted RBP16.67■□□□□ 0.26
HSPG2-208ENST00000471322 OR1F1O43749 312 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 NOBOXO60393 691 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 RFPL3O75679 317 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 CHRM5P08912 532 aaPredicted RBP16.67■□□□□ 0.26
HSPG2-208ENST00000471322 ACP1P24666 158 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 SLC19A1P41440 591 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 PLIN5Q00G26 463 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 CYP4F3Q08477 520 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 KIR2DS3Q14952 304 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 KIR2DS5Q14953 304 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 HKDC1Q2TB90 917 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 PERM1Q5SV97 790 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 OR4F3Q6IEY1 312 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 CYP2R1Q6VVX0 501 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 ERMP1Q7Z2K6 904 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 IFNEQ86WN2 208 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 SDR16C5Q8N3Y7 309 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 ANKRD53Q8N9V6 530 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 OR2L3Q8NG85 312 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 OR7A2PQ8NGA2 310 aa16.67■□□□□ 0.26
HSPG2-208ENST00000471322 OR4E2Q8NGC2 313 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms