RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 CFAP161Q6P656 301 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 BTNL8Q6UX41 500 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 C15orf52Q6ZUT6 534 aaKnown RBP1.05□□□□□ -2.24
UBXN4-207ENST00000471246 Q6ZVH6 145 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 COX8CQ7Z4L0 72 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 GPR141Q7Z602 305 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 HIPK1Q86Z02 1210 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 LRRC49Q8IUZ0 686 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 CROCCP3Q8IVE0 287 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 HSCBQ8IWL3 235 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 APCDD1Q8J025 514 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 RADILQ96JH8 1075 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 TNFRSF13CQ96RJ3 184 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 ALKBH7Q9BT30 221 aaPredicted RBP1.05□□□□□ -2.24
UBXN4-207ENST00000471246 SLC25A23Q9BV35 468 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 PINK1Q9BXM7 581 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 YTHDF1Q9BYJ9 559 aaKnown RBP1.05□□□□□ -2.24
UBXN4-207ENST00000471246 FAM129AQ9BZQ8 928 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 ANKRD2Q9GZV1 360 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 LIME1Q9H400 295 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 DPEP2Q9H4A9 486 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 C5orf66Q9H5L9 145 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 RPF1Q9H9Y2 349 aaKnown RBP1.05□□□□□ -2.24
UBXN4-207ENST00000471246 WDR41Q9HAD4 459 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 RAB9BQ9NP90 201 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 BCCIPQ9P287 314 aaKnown RBP eCLIP1.05□□□□□ -2.24
UBXN4-207ENST00000471246 DBF4Q9UBU7 674 aaPredicted RBP1.05□□□□□ -2.24
UBXN4-207ENST00000471246 SPATA2Q9UM82 520 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 LIPGQ9Y5X9 500 aa1.05□□□□□ -2.24
UBXN4-207ENST00000471246 TRAV18A0A075B6X5 111 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 IGKV6D-21A0A0A0MT36 114 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 TRBV5-4A0A0C4DH59 114 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 LOC390937A0A1W2PQ73 354 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 FAM168BA1KXE4 195 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 SRRM4A7MD48 611 aaKnown RBP1.04□□□□□ -2.24
UBXN4-207ENST00000471246 TMEM150CB9EJG8 249 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 NPIPA3F8WFD2 350 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 HAT1O14929 419 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 PPIP5K2O43314 1243 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 ZNF253O75346 499 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 KBTBD11O94819 623 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 OR6B1O95007 311 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 PGLSO95336 258 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 PENKP01210 267 aaPredicted RBP1.04□□□□□ -2.24
UBXN4-207ENST00000471246 GIG44P09565 113 aaPredicted RBP1.04□□□□□ -2.24
UBXN4-207ENST00000471246 SPP1P10451 314 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 ZBTB25P24278 435 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 CHRNA3P32297 505 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 DRD3P35462 400 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 PPIAP62937 165 aaKnown RBP1.04□□□□□ -2.24
UBXN4-207ENST00000471246 CNTN1Q12860 1018 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 CAMK2DQ13557 499 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 RFTN1Q14699 578 aaPredicted RBP1.04□□□□□ -2.24
UBXN4-207ENST00000471246 PPA1Q15181 289 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 MAPK11Q15759 364 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 ZNF79Q15937 498 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 CCL14Q16627 93 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 UGCGQ16739 394 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 HYAL4Q2M3T9 481 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 TIMM50Q3ZCQ8 353 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.04□□□□□ -2.24
UBXN4-207ENST00000471246 TCEAL6Q6IPX3 200 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 ZNF770Q6IQ21 691 aaPredicted RBP1.04□□□□□ -2.24
UBXN4-207ENST00000471246 KLHL10Q6JEL2 608 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 SLC30A6Q6NXT4 461 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 NUFIP2Q7Z417 695 aaKnown RBP1.04□□□□□ -2.24
UBXN4-207ENST00000471246 ABI3BPQ7Z7G0 1075 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 BANPQ8N9N5 519 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 OR6T1Q8NGN1 323 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 OR1B1Q8NGR6 318 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 LIPHQ8WWY8 451 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 BADQ92934 168 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 RMDN1Q96DB5 314 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 B3GALT6Q96L58 329 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 AK8Q96MA6 479 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 LINC00167Q96N53 147 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 RANBP9Q96S59 729 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 NAA11Q9BSU3 229 aaPredicted RBP1.04□□□□□ -2.24
UBXN4-207ENST00000471246 SLC39A8Q9C0K1 460 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 PNNQ9H307 717 aaKnown RBP1.04□□□□□ -2.24
UBXN4-207ENST00000471246 ST6GALNAC4Q9H4F1 302 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 SP140LQ9H930 580 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 CUTCQ9NTM9 273 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 MRGBPQ9NV56 204 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 TMOD3Q9NYL9 352 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 THYN1Q9P016 225 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 C5AR2Q9P296 337 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 NOCTQ9UK39 431 aaKnown RBP1.04□□□□□ -2.24
UBXN4-207ENST00000471246 GTF3C4Q9UKN8 822 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 MGAT4AQ9UM21 535 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 RUVBL2Q9Y230 463 aaKnown RBP1.04□□□□□ -2.24
UBXN4-207ENST00000471246 NCKAP1Q9Y2A7 1128 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 KLK4Q9Y5K2 254 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 SALL1Q9NSC2 1324 aa1.04□□□□□ -2.24
UBXN4-207ENST00000471246 COL4A4P53420 1690 aaPredicted RBP1.04□□□□□ -2.24
UBXN4-207ENST00000471246 TRAV9-2A0A087WT02 112 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 TEX48A0A1B0GUV7 120 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 BCLAF3A2AJT9 711 aaKnown RBP1.03□□□□□ -2.24
UBXN4-207ENST00000471246 IGLON5A6NGN9 336 aa1.03□□□□□ -2.24
UBXN4-207ENST00000471246 FOXI3A8MTJ6 420 aaPredicted RBP1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms