RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 MAGI3Q5TCQ9 1506 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 UGGT2Q9NYU1 1516 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 PTPRMP28827 1452 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 DHX29Q7Z478 1369 aaKnown RBP3.56□□□□□ -1.84
PRPF3-204ENST00000470824 TRBV2A0A0J9YWF9 115 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 GTPBP10A4D1E9 387 aaKnown RBP3.56□□□□□ -1.84
PRPF3-204ENST00000470824 NKX6-3A6NJ46 265 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 HHLA1C9JL84 531 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 SLC1A7O00341 560 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 RTCAO00442 366 aaKnown RBP3.56□□□□□ -1.84
PRPF3-204ENST00000470824 PSMD3O43242 534 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 HSF2BPO75031 334 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 ABHD2P08910 425 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 GSTA2P09210 222 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 CEACAM1P13688 526 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 CTNNA2P26232 953 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 LEPRP48357 1165 aaKnown RBP3.56□□□□□ -1.84
PRPF3-204ENST00000470824 SLC12A3P55017 1021 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 HUNKP57058 714 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 KRTAP10-11P60412 298 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 GALK2Q01415 458 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 WASHC5Q12768 1159 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 CEACAM7Q14002 265 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 EFTUD2Q15029 972 aaKnown RBP eCLIP3.56□□□□□ -1.84
PRPF3-204ENST00000470824 LRRC37A5PQ49AS3 106 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 ZNF776Q68DI1 518 aaPredicted RBP3.56□□□□□ -1.84
PRPF3-204ENST00000470824 B3GLCTQ6Y288 498 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 C17orf107Q6ZR85 190 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 MIER3Q7Z3K6 550 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 HOGA1Q86XE5 327 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 ZC3H3Q8IXZ2 948 aaKnown RBP3.56□□□□□ -1.84
PRPF3-204ENST00000470824 FBXW8Q8N3Y1 598 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 TEX26Q8N6G2 289 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 SIDT2Q8NBJ9 832 aaKnown RBP3.56□□□□□ -1.84
PRPF3-204ENST00000470824 OR5T2Q8NGG2 359 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 MAPK15Q8TD08 544 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 TMEM190Q8WZ59 177 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 HAS2Q92819 552 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 WBP2Q969T9 261 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 OMA1Q96E52 524 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 MAGED4Q96JG8 741 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 PRAC1Q96KF2 57 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 UBAC1Q9BSL1 405 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 TEX13AQ9BXU3 409 aaPredicted RBP3.56□□□□□ -1.84
PRPF3-204ENST00000470824 WWTR1Q9GZV5 400 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 ABCG8Q9H221 673 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 VIPAS39Q9H9C1 493 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 SDF2L1Q9HCN8 221 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.56□□□□□ -1.84
PRPF3-204ENST00000470824 RNF186Q9NXI6 227 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 UBQLN2Q9UHD9 624 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 TRMT6Q9UJA5 497 aaKnown RBP3.56□□□□□ -1.84
PRPF3-204ENST00000470824 TSPAN16Q9UKR8 245 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 ERVK-19Q9WJR5 959 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 KCNK6Q9Y257 313 aa3.56□□□□□ -1.84
PRPF3-204ENST00000470824 STRAPQ9Y3F4 350 aaKnown RBP3.56□□□□□ -1.84
PRPF3-204ENST00000470824 PREX1Q8TCU6 1659 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 ABCA8O94911 1581 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 A0A087WZ39 114 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 SLC15A5A6NIM6 579 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 IFITM10A6NMD0 228 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 MLNRO43193 412 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 SYT7O43581 403 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 ATP6V1G1O75348 118 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 SEC22BO75396 215 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 UMODP07911 640 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 MMP10P09238 476 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 PATE4P0C8F1 98 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 CEBPBP17676 345 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 SOX3P41225 446 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 CASP9P55211 416 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 PAX9P55771 341 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 XGP55808 180 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 STARD6P59095 220 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 CSNK2BP67870 215 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 TRA2AQ13595 282 aaKnown RBP eCLIP3.55□□□□□ -1.84
PRPF3-204ENST00000470824 HNRNPDQ14103 355 aaKnown RBP3.55□□□□□ -1.84
PRPF3-204ENST00000470824 GIT2Q14161 759 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 TAB1Q15750 504 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 FAM106AQ4KMX7 169 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 PARP10Q53GL7 1025 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 ATP1A1-AS1Q5TC04 95 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 RFPL4BQ6ZWI9 263 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 CYP4V2Q6ZWL3 525 aaPredicted RBP3.55□□□□□ -1.84
PRPF3-204ENST00000470824 PTAR1Q7Z6K3 402 aaPredicted RBP3.55□□□□□ -1.84
PRPF3-204ENST00000470824 OR13C5Q8NGS8 318 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 SPATA18Q8TC71 538 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 URGCPQ8TCY9 931 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 MRGPRDQ8TDS7 321 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 GANCQ8TET4 914 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 SMAP2Q8WU79 429 aaPredicted RBP3.55□□□□□ -1.84
PRPF3-204ENST00000470824 CASP10Q92851 521 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 AZIN2Q96A70 460 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 BPIFA2Q96DR5 249 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 C2orf48Q96LS8 159 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 PGLYRP2Q96PD5 576 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 PCDHB18PQ96TA0 734 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 FSD1Q9BTV5 496 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 TMEM245Q9H330 911 aa3.55□□□□□ -1.84
PRPF3-204ENST00000470824 DBF4Q9UBU7 674 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms