RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 ABHD13Q7L211 337 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 NLGN4XQ8N0W4 816 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 NLGN4YQ8NFZ3 816 aaPredicted RBP14.01□□□□□ -0.17
COL9A3-209ENST00000469852 CT55Q8WUE5 264 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 ZCCHC14Q8WYQ9 949 aaKnown RBP14.01□□□□□ -0.17
COL9A3-209ENST00000469852 MR1Q95460 341 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 NKD1Q969G9 470 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 NAF1Q96HR8 494 aaKnown RBP14.01□□□□□ -0.17
COL9A3-209ENST00000469852 C3orf30Q96M34 536 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 MAGEB18Q96M61 343 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 SERPINI1Q99574 410 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 ILKAPQ9H0C8 392 aaPredicted RBP14.01□□□□□ -0.17
COL9A3-209ENST00000469852 BRF2Q9HAW0 419 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 ANKHQ9HCJ1 492 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 ZNF304Q9HCX3 659 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 FAM53CQ9NYF3 392 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 PSD3Q9NYI0 1048 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 HCN3Q9P1Z3 774 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 GIMAP2Q9UG22 337 aa14.01□□□□□ -0.17
COL9A3-209ENST00000469852 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.01□□□□□ -0.17
COL9A3-209ENST00000469852 URADA6NGE7 173 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 TERTO14746 1132 aaKnown RBP14□□□□□ -0.17
COL9A3-209ENST00000469852 GBAP04062 536 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 KITP10721 976 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 LIPCP11150 499 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 F8A1P23610 371 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 STAT5AP42229 794 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 RPL14P50914 215 aaKnown RBP14□□□□□ -0.17
COL9A3-209ENST00000469852 DCDP81605 110 aaKnown RBP14□□□□□ -0.17
COL9A3-209ENST00000469852 BTKQ06187 659 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 RUNX2Q13950 521 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 MAP7Q14244 749 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 PDCD2Q16342 344 aaPredicted RBP14□□□□□ -0.17
COL9A3-209ENST00000469852 TMEM35AQ53FP2 167 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 XKR7Q5GH72 579 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 C10orf62Q5T681 223 aaPredicted RBP14□□□□□ -0.17
COL9A3-209ENST00000469852 ARHGAP40Q5TG30 622 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 TRIM40Q6P9F5 258 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 TRIM46Q7Z4K8 759 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 CACNA2D3Q8IZS8 1091 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 ESX1Q8N693 406 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 FGF11Q92914 225 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 RGMAQ96B86 450 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 MVB12AQ96EY5 273 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 APIPQ96GX9 242 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 PPP1R36Q96LQ0 422 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 CCDC86Q9H6F5 360 aaKnown RBP14□□□□□ -0.17
COL9A3-209ENST00000469852 DKK4Q9UBT3 224 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 CTSFQ9UBX1 484 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 SCN2AQ99250 2005 aa14□□□□□ -0.17
COL9A3-209ENST00000469852 H0YIG0 161 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 TAF4O00268 1085 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 SEMA3DO95025 777 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 ONECUT2O95948 504 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 KLK3P07288 261 aaPredicted RBP13.99□□□□□ -0.17
COL9A3-209ENST00000469852 HSD3B1P14060 373 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 FBLP22087 321 aaKnown RBP13.99□□□□□ -0.17
COL9A3-209ENST00000469852 ATP5A1P25705 553 aaKnown RBP13.99□□□□□ -0.17
COL9A3-209ENST00000469852 HSD3B2P26439 372 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 SSR2P43308 183 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 AVPR1BP47901 424 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 RAP1GDS1P52306 607 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 EFNA3P52797 238 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 PCBP4P57723 403 aaKnown RBP13.99□□□□□ -0.17
COL9A3-209ENST00000469852 RAE1P78406 368 aaKnown RBP13.99□□□□□ -0.17
COL9A3-209ENST00000469852 ZNF33BQ06732 778 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 CLN3Q13286 438 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 DSG2Q14126 1118 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 OR4C11Q6IEV9 310 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 PRMT9Q6P2P2 845 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 RIPOR1Q6ZS17 1223 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 RGS9BPQ6ZS82 235 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 RNF165Q6ZSG1 346 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 MAVSQ7Z434 540 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 COMMD6Q7Z4G1 85 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 VASH2Q86V25 355 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 DDIASQ8IXT1 998 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 CA13Q8N1Q1 262 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 METTL4Q8N3J2 472 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 C1orf52Q8N6N3 182 aaKnown RBP13.99□□□□□ -0.17
COL9A3-209ENST00000469852 GBP7Q8N8V2 638 aaPredicted RBP13.99□□□□□ -0.17
COL9A3-209ENST00000469852 ACOT4Q8N9L9 421 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 CHTF18Q8WVB6 975 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 COL26A1Q96A83 441 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 FAR2Q96K12 515 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 C7orf26Q96N11 449 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 KCNC2Q96PR1 638 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 TBCDQ9BTW9 1192 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 RBCK1Q9BYM8 510 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 VPS29Q9UBQ0 182 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 CROTQ9UKG9 612 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 PADI1Q9ULC6 663 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 NUP210LQ5VU65 1888 aa13.99□□□□□ -0.17
COL9A3-209ENST00000469852 ATP6AP2A0A1C7CYW4 349 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 TCP11X1B4DZS4 312 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 CHST10O43529 356 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 TMPRSS11DO60235 418 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 JRKO75564 520 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 ATP6AP2O75787 350 aa13.98□□□□□ -0.17
COL9A3-209ENST00000469852 SNUPNO95149 360 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms