RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 CHRNB1P11230 501 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 CCNA2P20248 432 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 KDELR2P33947 212 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 P2RY2P41231 377 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 CLCNKAP51800 687 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 PLA2G16P53816 162 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 PTPN5P54829 565 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 SELENBP1Q13228 472 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 GBX1Q14549 363 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 PRSS53Q2L4Q9 553 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 VMACQ2NL98 169 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 HNRNPA1L2Q32P51 320 aaKnown RBP9.04□□□□□ -0.96
TOP3A-203ENST00000469739 AGAP7PQ5VUJ5 663 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 ZDHHC20Q5W0Z9 365 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 USP43Q70EL4 1123 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 GPR149Q86SP6 731 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 ADHFE1Q8IWW8 467 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 PACRGLQ8N7B6 248 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 TNIP2Q8NFZ5 429 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 OR7G1Q8NGA0 311 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 LILRB4Q8NHJ6 448 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 CSGALNACT1Q8TDX6 532 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 DOK4Q8TEW6 326 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 CAPSLQ8WWF8 208 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 REXO5Q96IC2 774 aaKnown RBP9.04□□□□□ -0.96
TOP3A-203ENST00000469739 PLA2G2FQ9BZM2 168 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 RUVBL1Q9Y265 456 aaKnown RBP9.04□□□□□ -0.96
TOP3A-203ENST00000469739 CA5BQ9Y2D0 317 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 CACNA1IQ9P0X4 2223 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 LOC100130705A0A1B0GUX0 176 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 PIPSLA2A3N6 862 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 TRIM64BA6NI03 449 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 A6NL46 340 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 J3KTA2 159 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 SLC31A1O15431 190 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 SCN2BO60939 215 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 CLPXO76031 633 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 ALOX5P09917 674 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 IGFBP5P24593 272 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 MAP2K4P45985 399 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 PRIM2P49643 509 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 ABHD18Q0P651 414 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 TNFAIP8L2Q6P589 184 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-203ENST00000469739 THAP5Q7Z6K1 395 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 PTOV1Q86YD1 416 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 NLGN4XQ8N0W4 816 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 KIAA1958Q8N8K9 716 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 TFGQ92734 400 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-203ENST00000469739 RAB8BQ92930 207 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 ARMC5Q96C12 935 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 MUC13Q9H3R2 512 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 ENAMQ9NRM1 1142 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 ANKMY1Q9P2S6 941 aa9.04□□□□□ -0.96
TOP3A-203ENST00000469739 EXO1Q9UQ84 846 aaKnown RBP9.04□□□□□ -0.96
TOP3A-203ENST00000469739 SNRNP200O75643 2136 aaKnown RBP9.03□□□□□ -0.96
TOP3A-203ENST00000469739 FAM227AF5H4B4 570 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 IL3P08700 152 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 HOXB3P14651 431 aaPredicted RBP9.03□□□□□ -0.96
TOP3A-203ENST00000469739 GLULP15104 373 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 CHI3L1P36222 383 aaPredicted RBP9.03□□□□□ -0.96
TOP3A-203ENST00000469739 HSPB3Q12988 150 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 CAMK2GQ13555 558 aaPredicted RBP9.03□□□□□ -0.96
TOP3A-203ENST00000469739 CCNYL2Q5T2Q4 361 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 LIPJQ5W064 366 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 ATG9BQ674R7 924 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 FAAH2Q6GMR7 532 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 DGLUCYQ7Z3D6 616 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 RNF130Q86XS8 419 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 DCP2Q8IU60 420 aaKnown RBP9.03□□□□□ -0.96
TOP3A-203ENST00000469739 ZZZ3Q8IYH5 903 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 KCNC2Q96PR1 638 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 MIEF1Q9NQG6 463 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 CTPS2Q9NRF8 586 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 TMEM184CQ9NVA4 438 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 SIRT5Q9NXA8 310 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 TMEM9Q9P0T7 183 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 PCDHGA3Q9Y5H0 932 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 LRRK1Q38SD2 2015 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 FRYLO94915 3013 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 SEC16AO15027 2179 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 SCAMP2O15127 329 aaKnown RBP9.03□□□□□ -0.96
TOP3A-203ENST00000469739 VIPP01282 170 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 IDSP22304 550 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 GZMMP51124 257 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 IFITM2Q01629 132 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 SP140Q13342 867 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 DMC1Q14565 340 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 ELAVL3Q14576 367 aaKnown RBP9.03□□□□□ -0.96
TOP3A-203ENST00000469739 ERN2Q76MJ5 926 aaKnown RBP9.03□□□□□ -0.96
TOP3A-203ENST00000469739 FRMD1Q8N878 549 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 OR9A1PQ8NGU1 263 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 NFKBIDQ8NI38 313 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 ATL1Q8WXF7 558 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 EXOSC8Q96B26 276 aaKnown RBP9.03□□□□□ -0.96
TOP3A-203ENST00000469739 ASB16Q96NS5 453 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 LHPPQ9H008 270 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 TMEM245Q9H330 911 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 CCDC177Q9NQR7 707 aaPredicted RBP9.03□□□□□ -0.96
TOP3A-203ENST00000469739 RAB23Q9ULC3 237 aa9.03□□□□□ -0.96
TOP3A-203ENST00000469739 ORC6Q9Y5N6 252 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms