RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 LRRC61Q9BV99 259 aa6.06□□□□□ -1.44
PTCD3-208ENST00000469585 CLPBQ9H078 707 aa6.06□□□□□ -1.44
PTCD3-208ENST00000469585 OR2AG1Q9H205 316 aa6.06□□□□□ -1.44
PTCD3-208ENST00000469585 CDCP1Q9H5V8 836 aa6.06□□□□□ -1.44
PTCD3-208ENST00000469585 C10orf88Q9H8K7 445 aa6.06□□□□□ -1.44
PTCD3-208ENST00000469585 NFKBIL1Q9UBC1 381 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-208ENST00000469585 SUFUQ9UMX1 484 aa6.06□□□□□ -1.44
PTCD3-208ENST00000469585 VPS4AQ9UN37 437 aa6.06□□□□□ -1.44
PTCD3-208ENST00000469585 C19orf53Q9UNZ5 99 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-208ENST00000469585 R3HDM2Q9Y2K5 976 aaKnown RBP6.06□□□□□ -1.44
PTCD3-208ENST00000469585 HEBP2Q9Y5Z4 205 aa6.06□□□□□ -1.44
PTCD3-208ENST00000469585 ARL5AQ9Y689 179 aa6.06□□□□□ -1.44
PTCD3-208ENST00000469585 OTOGLQ3ZCN5 2332 aa6.06□□□□□ -1.44
PTCD3-208ENST00000469585 TNRC6BQ9UPQ9 1833 aaKnown RBP6.06□□□□□ -1.44
PTCD3-208ENST00000469585 PLXNA2O75051 1894 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 KIR2DS5A0A0G2JLQ3 304 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 A0A0G2JNG1 304 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 A0A0U1RQJ8 604 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 LRRC3CA6NJW4 275 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 EFCAB8A8MWE9 144 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 E5RI56 91 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 H0Y3Z8 333 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 KIR2DS3K7RE56 304 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 NKX2-8O15522 239 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 DUX1O43812 170 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 USP12O75317 370 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 NDUFS3O75489 264 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 SRP72O76094 671 aaKnown RBP6.05□□□□□ -1.44
PTCD3-208ENST00000469585 RPN2P04844 631 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 POLBP06746 335 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 NHLRC4P0CG21 123 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-208ENST00000469585 CKMT1AP12532 417 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 ACP5P13686 325 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 ZNF7P17097 686 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-208ENST00000469585 TPSB2P20231 275 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 ACP1P24666 158 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 NDUFS1P28331 727 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 PBLDP30039 288 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-208ENST00000469585 THBS4P35443 961 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 TTPAP49638 278 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 TERF1P54274 439 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 PRKAA2P54646 552 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 ARL4CP56559 192 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 SF3A3Q12874 501 aaKnown RBP eCLIP6.05□□□□□ -1.447e-9■■□□□ 11.9
PTCD3-208ENST00000469585 ILF2Q12905 390 aaKnown RBP6.05□□□□□ -1.44
PTCD3-208ENST00000469585 NFATC2Q13469 925 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 KIR2DS5Q14953 304 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 MFSD13AQ14CX5 517 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 LARS2Q15031 903 aaKnown RBP6.05□□□□□ -1.44
PTCD3-208ENST00000469585 TRIP13Q15645 432 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-208ENST00000469585 OASLQ15646 514 aaKnown RBP6.05□□□□□ -1.44
PTCD3-208ENST00000469585 TPSAB1Q15661 275 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 CDKN3Q16667 212 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 RANBP10Q6VN20 620 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 SYT10Q6XYQ8 523 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 EFL1Q7Z2Z2 1120 aaKnown RBP6.05□□□□□ -1.44
PTCD3-208ENST00000469585 PIP4P1Q86T03 277 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 MOGAT3Q86VF5 341 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 AMZ2Q86W34 360 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 KLHL7Q8IXQ5 586 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 RBFAQ8N0V3 343 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 RASGEF1CQ8N431 466 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 BOLLQ8N9W6 283 aaKnown RBP6.05□□□□□ -1.44
PTCD3-208ENST00000469585 OR52K1Q8NGK4 314 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 TADA1Q96BN2 335 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 PDXPQ96GD0 296 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 FAR2Q96K12 515 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 APOLD1Q96LR9 279 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 C16orf45Q96MC5 204 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-208ENST00000469585 FOPNLQ96NB1 174 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 PANX3Q96QZ0 392 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 GFM1Q96RP9 751 aaKnown RBP6.05□□□□□ -1.44
PTCD3-208ENST00000469585 TRIB3Q96RU7 358 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 TIMM29Q9BSF4 260 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 NAT9Q9BTE0 207 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 CCDC134Q9H6E4 229 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 SAYSD1Q9NPB0 183 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 NLE1Q9NVX2 485 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-208ENST00000469585 IL17CQ9P0M4 197 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 TXNDC16Q9P2K2 825 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 SLC17A4Q9Y2C5 497 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 TMEM98Q9Y2Y6 226 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 MAD1L1Q9Y6D9 718 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 FAM169AQ9Y6X4 670 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 COLEC10Q9Y6Z7 277 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 WDFY4Q6ZS81 3184 aa6.05□□□□□ -1.44
PTCD3-208ENST00000469585 CACNA1EQ15878 2313 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 ADAMTS9Q9P2N4 1935 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 TMEM8BA6NDV4 472 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 TMEM202A6NGA9 273 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 HMX3A6NHT5 357 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 SDR42E2A6NKP2 422 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 H3BMM5 538 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 CLIC1O00299 241 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 NUDT21O43809 227 aaKnown RBP6.04□□□□□ -1.44
PTCD3-208ENST00000469585 AP2A2O94973 939 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 METTL18O95568 372 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 TTC4O95801 387 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 MLNP12872 115 aa6.04□□□□□ -1.44
PTCD3-208ENST00000469585 ATP1B2P14415 290 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms