RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 ITGA9Q13797 1035 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 MAPK11Q15759 364 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 ADAMTSL4-AS1Q5T5F5 129 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 PWWP2BQ6NUJ5 590 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 C15orf52Q6ZUT6 534 aaKnown RBP4.4□□□□□ -1.71
LSM5-209ENST00000468872 TRMT11Q7Z4G4 463 aaKnown RBP4.4□□□□□ -1.71
LSM5-209ENST00000468872 PEX5LQ8IYB4 626 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 TEX26Q8N6G2 289 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 DDHD1Q8NEL9 900 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 SEPT8Q92599 483 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 GGHQ92820 318 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 FBXO17Q96EF6 278 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 GMPPAQ96IJ6 420 aaPredicted RBP4.4□□□□□ -1.71
LSM5-209ENST00000468872 LITAFQ99732 161 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 DDX50Q9BQ39 737 aaKnown RBP4.4□□□□□ -1.71
LSM5-209ENST00000468872 NAPBQ9H115 298 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 ATAD3AQ9NVI7 634 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 COMMD8Q9NX08 183 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 MIS18AQ9NYP9 233 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 TMEM181Q9P2C4 612 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 POLKQ9UBT6 870 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 MAD2L2Q9UI95 211 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 TEX264Q9Y6I9 313 aa4.4□□□□□ -1.71
LSM5-209ENST00000468872 MYH14Q7Z406 1995 aaKnown RBP4.4□□□□□ -1.71
LSM5-209ENST00000468872 PLB1Q6P1J6 1458 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 TMEM129A0AVI4 362 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 GTPBP10A4D1E9 387 aaKnown RBP4.39□□□□□ -1.71
LSM5-209ENST00000468872 C15orf61A6NNL5 157 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 ZG16O60844 167 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 GRAP2O75791 330 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 GJB2P29033 226 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 BTG1P62324 171 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 GRB14Q14449 540 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 TAB1Q15750 504 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 LRRC37A5PQ49AS3 106 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 ATP1A1-AS1Q5TC04 95 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 SLC27A4Q6P1M0 643 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 C17orf107Q6ZR85 190 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 ZNF410Q86VK4 478 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 THEM5Q8N1Q8 247 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 CHCHD4Q8N4Q1 142 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 RTL3Q8N8U3 475 aaKnown RBP4.39□□□□□ -1.71
LSM5-209ENST00000468872 CASP10Q92851 521 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 DUX3Q96PT4 197 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 GAL3ST4Q96RP7 486 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 TSPYL1Q9H0U9 437 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 WDR13Q9H1Z4 485 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 THAP9Q9H5L6 903 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 ZDHHC6Q9H6R6 413 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 SCRT2Q9NQ03 307 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 PSORS1C1Q9UIG5 152 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 KCNK6Q9Y257 313 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 FOXA2Q9Y261 457 aaPredicted RBP4.39□□□□□ -1.71
LSM5-209ENST00000468872 EXOC6BQ9Y2D4 811 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 SELENOKQ9Y6D0 94 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 CACNA1AO00555 2505 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 NEDD4P46934 1319 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 NHSL1Q5SYE7 1610 aa4.39□□□□□ -1.71
LSM5-209ENST00000468872 PREX1Q8TCU6 1659 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 MAGI1Q96QZ7 1491 aaPredicted RBP4.38□□□□□ -1.71
LSM5-209ENST00000468872 TOPBP1Q92547 1522 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 C2orf92A0A1B0GVN3 265 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 MEIOCA2RUB1 952 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 SERINC4A6NH21 518 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 SLC1A7O00341 560 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 MAGEB2O15479 319 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 ZBTB14O43829 449 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 CLN5O75503 358 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 CLDN1O95832 211 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 SERPINB2P05120 415 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 NUDT17P0C025 328 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 CPA3P15088 417 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 STMN1P16949 149 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 NT5C2P49902 561 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 KRTAP10-12P60413 245 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 SNRPD1P62314 119 aaKnown RBP4.38□□□□□ -1.71
LSM5-209ENST00000468872 GPR50Q13585 617 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 MTF1Q14872 753 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 FAM106AQ4KMX7 169 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 ZNF776Q68DI1 518 aaPredicted RBP4.38□□□□□ -1.71
LSM5-209ENST00000468872 ARHGAP11AQ6P4F7 1023 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 FIP1L1Q6UN15 594 aaKnown RBP4.38□□□□□ -1.71
LSM5-209ENST00000468872 MACC1Q6ZN28 852 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 Q6ZRP5 223 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 RNF149Q8NC42 400 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 OR6S1Q8NH40 331 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 MAPK15Q8TD08 544 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 MRGPRDQ8TDS7 321 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 SLC35C1Q96A29 364 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 BPIFA2Q96DR5 249 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 OMA1Q96E52 524 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 MAGED4Q96JG8 741 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 LURAP1Q96LR2 239 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 PRAM1Q96QH2 718 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 PRMT8Q9NR22 394 aaPredicted RBP4.38□□□□□ -1.71
LSM5-209ENST00000468872 PLCXD1Q9NUJ7 323 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 PPP1R3CQ9UQK1 317 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 MRPS28Q9Y2Q9 187 aaKnown RBP4.38□□□□□ -1.71
LSM5-209ENST00000468872 RPGRIP1LQ68CZ1 1315 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 KIAA0556O60303 1618 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms