RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 RNH1P13489 461 aaKnown RBP10.85□□□□□ -0.67
CDHR3-205ENST00000468143 EPB42P16452 691 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 JAK1P23458 1154 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 SOX11P35716 441 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 SERPINB9P50453 376 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 ZNF33BQ06732 778 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 SRSF1Q07955 248 aaKnown RBP eCLIP10.85□□□□□ -0.67
CDHR3-205ENST00000468143 MRPL49Q13405 166 aaKnown RBP10.85□□□□□ -0.67
CDHR3-205ENST00000468143 LAPTM5Q13571 262 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 ZNF169Q14929 603 aaPredicted RBP10.85□□□□□ -0.67
CDHR3-205ENST00000468143 SETDB1Q15047 1291 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 TLR1Q15399 786 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 PAGE2BQ5JRK9 111 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 KLC3Q6P597 504 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 RIPOR1Q6ZS17 1223 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 CCDC91Q7Z6B0 441 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 GSPT2Q8IYD1 628 aaKnown RBP10.85□□□□□ -0.67
CDHR3-205ENST00000468143 GALNT11Q8NCW6 608 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 OR2L5Q8NG80 312 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 UBTD2Q8WUN7 234 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 SCYL1Q96KG9 808 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 QRFPRQ96P65 431 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 LPAR4Q99677 370 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 PITHD1Q9GZP4 211 aaPredicted RBP10.85□□□□□ -0.67
CDHR3-205ENST00000468143 KCNK13Q9HB14 408 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 PCDHGA10Q9Y5H3 936 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 GCN1Q92616 2671 aaKnown RBP10.85□□□□□ -0.67
CDHR3-205ENST00000468143 BOD1L1Q8NFC6 3051 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 ANKRD12Q6UB98 2062 aa10.85□□□□□ -0.67
CDHR3-205ENST00000468143 BSNQ9UPA5 3926 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 MYOCOSA0A1B0GUC4 107 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 EXOC1LA0A1B0GW35 172 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 DYTNA2CJ06 578 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 RTCAO00442 366 aaKnown RBP10.84□□□□□ -0.67
CDHR3-205ENST00000468143 B3GALT2O43825 422 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 KLK8O60259 260 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 MAN1A2O60476 641 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 KRT38O76015 456 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 CYC1P08574 325 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 CERS1P27544 350 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 CASP2P42575 452 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 HNRNPFP52597 415 aaKnown RBP10.84□□□□□ -0.67
CDHR3-205ENST00000468143 ALDH18A1P54886 795 aaKnown RBP10.84□□□□□ -0.67
CDHR3-205ENST00000468143 SRSF11Q05519 484 aaKnown RBP10.84□□□□□ -0.67
CDHR3-205ENST00000468143 DDX39BQ13838 428 aaKnown RBP10.84□□□□□ -0.67
CDHR3-205ENST00000468143 UBAP2LQ14157 1087 aaKnown RBP10.84□□□□□ -0.67
CDHR3-205ENST00000468143 NR6A1Q15406 480 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 TBCCQ15814 346 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 EIF2S3LQ2VIR3 472 aaKnown RBP10.84□□□□□ -0.67
CDHR3-205ENST00000468143 ADPRMQ3LIE5 342 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 TECRLQ5HYJ1 363 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 ABHD17BQ5VST6 288 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 PLAG1Q6DJT9 500 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 MED27Q6P2C8 311 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 TRIM40Q6P9F5 258 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 ABHD17CQ6PCB6 329 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 TAOK1Q7L7X3 1001 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 UBE3DQ7Z6J8 389 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 PTGR2Q8N8N7 351 aaPredicted RBP10.84□□□□□ -0.67
CDHR3-205ENST00000468143 FAM47BQ8NA70 645 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 TMEM52Q8NDY8 209 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 M1APQ8TC57 530 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 ZNF473Q8WTR7 871 aaKnown RBP10.84□□□□□ -0.67
CDHR3-205ENST00000468143 HAS2Q92819 552 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 PHF21BQ96EK2 531 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.84□□□□□ -0.67
CDHR3-205ENST00000468143 CLK4Q9HAZ1 481 aaKnown RBP10.84□□□□□ -0.67
CDHR3-205ENST00000468143 PRDM9Q9NQV7 894 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 PRDM7Q9NQW5 492 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 SCN3AQ9NY46 2000 aa10.84□□□□□ -0.67
CDHR3-205ENST00000468143 RIPK2O43353 540 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 SNRPAP09012 282 aaKnown RBP10.83□□□□□ -0.68
CDHR3-205ENST00000468143 GSTM2P28161 218 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 GCAP28676 217 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 EEF1DP29692 281 aaKnown RBP10.83□□□□□ -0.68
CDHR3-205ENST00000468143 MAGEA12P43365 314 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 PIK3CGP48736 1102 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 MTTPP55157 894 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 LIM2P55344 173 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 RAB38P57729 211 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 SLC26A5P58743 744 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 SLC13A2Q13183 592 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 GTF2H2Q13888 395 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 SLC29A2Q14542 456 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 NAA30Q147X3 362 aaPredicted RBP10.83□□□□□ -0.68
CDHR3-205ENST00000468143 PCBP2Q15366 365 aaKnown RBP eCLIP10.83□□□□□ -0.68
CDHR3-205ENST00000468143 EXT1Q16394 746 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 GRHL2Q6ISB3 625 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 GTF2H2CQ6P1K8 395 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 QSOX2Q6ZRP7 698 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 TRMT10CQ7L0Y3 403 aaKnown RBP10.83□□□□□ -0.68
CDHR3-205ENST00000468143 GOLGA7Q7Z5G4 137 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 CLNKQ7Z7G1 428 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 CRLF3Q8IUI8 442 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 LAS2Q8IYD9 372 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 KIF2BQ8N4N8 673 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 OR7G3Q8NG95 312 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 PRR7Q8TB68 274 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 GRHL3Q8TE85 626 aa10.83□□□□□ -0.68
CDHR3-205ENST00000468143 ISL2Q96A47 359 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms