RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 PAGE2Q7Z2X7 111 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 NUDT13Q86X67 352 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 DTX1Q86Y01 620 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 DDIASQ8IXT1 998 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 ESX1Q8N693 406 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 CHTF18Q8WVB6 975 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 FKBP10Q96AY3 582 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 PPP3R2Q96LZ3 170 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 ZNF317Q96PQ6 595 aaPredicted RBP14.4□□□□□ -0.1
NPHP4-205ENST00000466897 COPS7BQ9H9Q2 264 aaPredicted RBP14.4□□□□□ -0.1
NPHP4-205ENST00000466897 ZNF304Q9HCX3 659 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 TMED5Q9Y3A6 229 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 NAALAD2Q9Y3Q0 740 aa14.4□□□□□ -0.1
NPHP4-205ENST00000466897 IGLV3-12A0A075B6K2 115 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 A0A0A6YYC8 382 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-205ENST00000466897 I3L1I5 382 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-205ENST00000466897 ZNF195O14628 629 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 SKAP2O75563 359 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-205ENST00000466897 ALBP02768 609 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 JUNP05412 331 aaKnown RBP14.39□□□□□ -0.11
NPHP4-205ENST00000466897 CD63P08962 238 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 LINC00032P0C843 101 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 PRR35P0CG20 571 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 IL10P22301 178 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 ALAS2P22557 587 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 ATP5A1P25705 553 aaKnown RBP14.39□□□□□ -0.11
NPHP4-205ENST00000466897 SSR2P43308 183 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 GSTM5P46439 218 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 HMGCS1Q01581 520 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 ACSM2AQ08AH3 577 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 KIAA0040Q15053 153 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 PDCD2Q16342 344 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-205ENST00000466897 NKAIN1Q4KMZ8 207 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 ACSM2BQ68CK6 577 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 SCIMPQ6UWF3 145 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 ZNF793Q6ZN11 406 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 FAM47EQ6ZV65 393 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 PRSS41Q7RTY9 318 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 COMMD6Q7Z4G1 85 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 NLGN4XQ8N0W4 816 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 AMER3Q8N944 861 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 ACOT4Q8N9L9 421 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 GALNT6Q8NCL4 622 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 NLGN4YQ8NFZ3 816 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-205ENST00000466897 OR9A4Q8NGU2 314 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 OR2T11Q8NH01 316 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 ADAMTS18Q8TE60 1221 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 MMABQ96EY8 250 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-205ENST00000466897 MAELQ96JY0 434 aaKnown RBP14.39□□□□□ -0.11
NPHP4-205ENST00000466897 FCRL1Q96LA6 429 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 MRPL1Q9BYD6 325 aaKnown RBP14.39□□□□□ -0.11
NPHP4-205ENST00000466897 SLC26A1Q9H2B4 701 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 LYRM4Q9HD34 91 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 PRM3Q9NNZ6 103 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 C1orf109Q9NX04 203 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 MARCOQ9UEW3 520 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-205ENST00000466897 NDOR1Q9UHB4 597 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 PADI1Q9ULC6 663 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 MAP4K5Q9Y4K4 846 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 PTGDR2Q9Y5Y4 395 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 USH1CQ9Y6N9 552 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 CCDC88CQ9P219 2028 aa14.39□□□□□ -0.11
NPHP4-205ENST00000466897 A0A0A6YYD5 115 aa14.38□□□□□ -0.11
NPHP4-205ENST00000466897 SAP18O00422 153 aaKnown RBP14.38□□□□□ -0.11
NPHP4-205ENST00000466897 B3GALT2O43825 422 aa14.38□□□□□ -0.11
NPHP4-205ENST00000466897 CCNYL3P0C7X3 344 aa14.38□□□□□ -0.11
NPHP4-205ENST00000466897 LIPCP11150 499 aa14.38□□□□□ -0.11
NPHP4-205ENST00000466897 BTN3A2P78410 334 aa14.38□□□□□ -0.11
NPHP4-205ENST00000466897 NR6A1Q15406 480 aa14.38□□□□□ -0.11
NPHP4-205ENST00000466897 MRM1Q6IN84 353 aaKnown RBP14.38□□□□□ -0.11
NPHP4-205ENST00000466897 COX15Q7KZN9 410 aa14.38□□□□□ -0.11
NPHP4-205ENST00000466897 TIPARPQ7Z3E1 657 aaKnown RBP14.38□□□□□ -0.11
NPHP4-205ENST00000466897 ZFAND4Q86XD8 727 aa14.38□□□□□ -0.11
NPHP4-205ENST00000466897 PARP9Q8IXQ6 854 aa14.38□□□□□ -0.11
NPHP4-205ENST00000466897 GATA6Q92908 595 aa14.38□□□□□ -0.11
NPHP4-205ENST00000466897 APIPQ96GX9 242 aa14.38□□□□□ -0.11
NPHP4-205ENST00000466897 C3orf30Q96M34 536 aa14.38□□□□□ -0.11
NPHP4-205ENST00000466897 NUF2Q9BZD4 464 aa14.38□□□□□ -0.11
NPHP4-205ENST00000466897 TGIF2Q9GZN2 237 aa14.38□□□□□ -0.11
NPHP4-205ENST00000466897 WDR54Q9H977 334 aa14.38□□□□□ -0.11
NPHP4-205ENST00000466897 LRTM1Q9HBL6 345 aa14.38□□□□□ -0.11
NPHP4-205ENST00000466897 SLC22A11Q9NSA0 550 aa14.38□□□□□ -0.11
NPHP4-205ENST00000466897 MCM8Q9UJA3 840 aa14.38□□□□□ -0.11
NPHP4-205ENST00000466897 C21orf140B9A014 251 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 SGK494L7N484 410 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 RTCAO00442 366 aaKnown RBP14.37□□□□□ -0.11
NPHP4-205ENST00000466897 SDHDO14521 159 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 RAD1O60671 282 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 SH3BGRLO75368 114 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 RDH16O75452 317 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 RAB40ALP0C0E4 278 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 KITP10721 976 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 PCSK2P16519 638 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 FBLP22087 321 aaKnown RBP14.37□□□□□ -0.11
NPHP4-205ENST00000466897 TPP2P29144 1249 aaPredicted RBP14.37□□□□□ -0.11
NPHP4-205ENST00000466897 TIA1P31483 386 aaKnown RBP eCLIP14.37□□□□□ -0.11
NPHP4-205ENST00000466897 LSP1P33241 339 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 STAT5AP42229 794 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 OR1D4P47884 311 aa14.37□□□□□ -0.11
NPHP4-205ENST00000466897 TRA2BP62995 288 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms