RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 CYP4F2P78329 520 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 IMPG1Q17R60 797 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 TMIGD1Q6UXZ0 262 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 OR4K1Q8NGD4 311 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 ZFPM2Q8WW38 1151 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 APIPQ96GX9 242 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 EFCAB11Q9BUY7 163 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 EVA1BQ9NVM1 165 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 PCDHGA11Q9Y5H2 935 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 RNF215Q9Y6U7 377 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 SAP18O00422 153 aaKnown RBP17.78■□□□□ 0.44
CAPN3-209ENST00000466222 TGFB1P01137 390 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 PVRP15151 417 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 UFM1P61960 85 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 RPS13P62277 151 aaKnown RBP17.78■□□□□ 0.44
CAPN3-209ENST00000466222 SMU1Q2TAY7 513 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 C14orf28Q4W4Y0 310 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 PAGE3Q5JUK9 113 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 C6orf132Q5T0Z8 1188 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 FKBP9P1Q75LS8 142 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 KANSL1Q7Z3B3 1105 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 LAS2Q8IYD9 372 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 DNAJB14Q8TBM8 379 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 SAP25Q8TEE9 199 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 MACROD1Q9BQ69 325 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 GTPBP2Q9BX10 602 aaKnown RBP17.78■□□□□ 0.44
CAPN3-209ENST00000466222 TWSG1Q9GZX9 223 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 ZNF639Q9UID6 485 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 GMEB2Q9UKD1 530 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 PCDHB3Q9Y5E6 796 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 PLOD2O00469 737 aa17.77■□□□□ 0.44
CAPN3-209ENST00000466222 HAT1O14929 419 aa17.77■□□□□ 0.44
CAPN3-209ENST00000466222 ACOX3O15254 700 aa17.77■□□□□ 0.44
CAPN3-209ENST00000466222 RGS14O43566 566 aa17.77■□□□□ 0.44
CAPN3-209ENST00000466222 TBX6O95947 436 aaPredicted RBP17.77■□□□□ 0.44
CAPN3-209ENST00000466222 LDLRP01130 860 aa17.77■□□□□ 0.44
CAPN3-209ENST00000466222 MAGP20916 626 aa17.77■□□□□ 0.44
CAPN3-209ENST00000466222 RPL38P63173 70 aaKnown RBP17.77■□□□□ 0.44
CAPN3-209ENST00000466222 BIRC2Q13490 618 aa17.77■□□□□ 0.44
CAPN3-209ENST00000466222 LRRC23Q53EV4 343 aaPredicted RBP17.77■□□□□ 0.44
CAPN3-209ENST00000466222 NKAIN2Q5VXU1 208 aa17.77■□□□□ 0.44
CAPN3-209ENST00000466222 NANOGP8Q6NSW7 305 aa17.77■□□□□ 0.44
CAPN3-209ENST00000466222 RNF165Q6ZSG1 346 aa17.77■□□□□ 0.44
CAPN3-209ENST00000466222 VPS33AQ96AX1 596 aa17.77■□□□□ 0.44
CAPN3-209ENST00000466222 TEX37Q96LM6 180 aa17.77■□□□□ 0.44
CAPN3-209ENST00000466222 NANOGQ9H9S0 305 aa17.77■□□□□ 0.44
CAPN3-209ENST00000466222 SMPD3Q9NY59 655 aaPredicted RBP17.77■□□□□ 0.44
CAPN3-209ENST00000466222 LRIT1Q9P2V4 623 aa17.77■□□□□ 0.44
CAPN3-209ENST00000466222 OAZ3Q9UMX2 235 aa17.77■□□□□ 0.44
CAPN3-209ENST00000466222 SLC28A1O00337 649 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 OR1F1O43749 312 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 SEC22BO75396 215 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 UBXN7O94888 489 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 ALDH4A1P30038 563 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 CAPGP40121 348 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 KIAA0040Q15053 153 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 ZBED5Q49AG3 693 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 RABL3Q5HYI8 236 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 PAGE2BQ5JRK9 111 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 SLC23A3Q6PIS1 610 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 GPR141Q7Z602 305 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 KIAA2013Q8IYS2 634 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 SDR16C5Q8N3Y7 309 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 SLC38A3Q99624 504 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 BDH2Q9BUT1 245 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 OR51B5Q9H339 312 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 PELI2Q9HAT8 420 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 LRTM1Q9HBL6 345 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 SLC6A14Q9UN76 642 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 CSNK1G3Q9Y6M4 447 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 OR5K3A6NET4 321 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 ARHGAP33O14559 1287 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 MPLP40238 635 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 KIR2DS3Q14952 304 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 HIST2H2ACQ16777 129 aaPredicted RBP17.76■□□□□ 0.43
CAPN3-209ENST00000466222 HIST2H2AA3Q6FI13 130 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 PATL1Q86TB9 770 aaKnown RBP17.76■□□□□ 0.43
CAPN3-209ENST00000466222 ZNF786Q8N393 782 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 DHRSXQ8N5I4 330 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 FAM110BQ8TC76 370 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 PROKR1Q8TCW9 393 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 AIF1LQ9BQI0 150 aa17.76■□□□□ 0.43
CAPN3-209ENST00000466222 A0A1B0GVG6 124 aa17.75■□□□□ 0.43
CAPN3-209ENST00000466222 PRR33A8MZF0 331 aa17.75■□□□□ 0.43
CAPN3-209ENST00000466222 H0YAE9 185 aa17.75■□□□□ 0.43
CAPN3-209ENST00000466222 CLOCKO15516 846 aa17.75■□□□□ 0.43
CAPN3-209ENST00000466222 G6PDP11413 515 aa17.75■□□□□ 0.43
CAPN3-209ENST00000466222 CMPK1P30085 196 aa17.75■□□□□ 0.43
CAPN3-209ENST00000466222 BCL6P41182 706 aa17.75■□□□□ 0.43
CAPN3-209ENST00000466222 REEP5Q00765 189 aa17.75■□□□□ 0.43
CAPN3-209ENST00000466222 TIGD2Q4W5G0 525 aa17.75■□□□□ 0.43
CAPN3-209ENST00000466222 ARL10Q8N8L6 244 aa17.75■□□□□ 0.43
CAPN3-209ENST00000466222 CEP76Q8TAP6 659 aa17.75■□□□□ 0.43
CAPN3-209ENST00000466222 LZICQ8WZA0 190 aa17.75■□□□□ 0.43
CAPN3-209ENST00000466222 MAGEB10Q96LZ2 347 aaPredicted RBP17.75■□□□□ 0.43
CAPN3-209ENST00000466222 NSMCE2Q96MF7 247 aa17.75■□□□□ 0.43
CAPN3-209ENST00000466222 DMRT3Q9NQL9 472 aa17.75■□□□□ 0.43
CAPN3-209ENST00000466222 DLGAP4Q9Y2H0 992 aa17.75■□□□□ 0.43
CAPN3-209ENST00000466222 POLR3HQ9Y535 204 aaPredicted RBP17.75■□□□□ 0.43
CAPN3-209ENST00000466222 FAM149AA5PLN7 773 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms