RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 ZNF687Q8N1G0 1237 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 FBXL6Q8N531 539 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 RMND5BQ96G75 393 aaPredicted RBP17.43■□□□□ 0.38
COL9A3-205ENST00000466192 TOE1Q96GM8 510 aaKnown RBP17.43■□□□□ 0.38
COL9A3-205ENST00000466192 GRIP2Q9C0E4 1043 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 MRPS30Q9NP92 439 aaKnown RBP17.43■□□□□ 0.38
COL9A3-205ENST00000466192 ATAD3AQ9NVI7 634 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 SPASTQ9UBP0 616 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 G3V2T6 193 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 SEC24DO94855 1032 aaPredicted RBP17.43■□□□□ 0.38
COL9A3-205ENST00000466192 MYF6P23409 242 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 RPL5P46777 297 aaKnown RBP17.43■□□□□ 0.38
COL9A3-205ENST00000466192 HBA1P69905 142 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 APOFQ13790 326 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 ADRM1Q16186 407 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 OFCC1Q8IZS5 231 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 SLC22A18ASQ8N1D0 253 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 METTL25Q8N6Q8 603 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 OR2L3Q8NG85 312 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 OR13H1Q8NG92 308 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 CREB3L4Q8TEY5 395 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 MAGIXQ9H6Y5 334 aa17.43■□□□□ 0.38
COL9A3-205ENST00000466192 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.43■□□□□ 0.38
COL9A3-205ENST00000466192 TRBV23OR9-2A0A075B6M9 112 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 A6NCN8 305 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 H3BNH8 94 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 SOX1O00570 391 aaPredicted RBP17.42■□□□□ 0.38
COL9A3-205ENST00000466192 MAN2B1O00754 1011 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 PABPC4LP0CB38 370 aaKnown RBP17.42■□□□□ 0.38
COL9A3-205ENST00000466192 HOXB3P14651 431 aaPredicted RBP17.42■□□□□ 0.38
COL9A3-205ENST00000466192 RPL3P39023 403 aaKnown RBP17.42■□□□□ 0.38
COL9A3-205ENST00000466192 CAPGP40121 348 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 ALDH3A2P51648 485 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 DAG1Q14118 895 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 SPIDRQ14159 915 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 ZIK1Q3SY52 487 aaPredicted RBP17.42■□□□□ 0.38
COL9A3-205ENST00000466192 CPZQ66K79 652 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 ANGPTL8Q6UXH0 198 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 ZNF852Q6ZMS4 543 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 IKBIPQ70UQ0 350 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 SYT13Q7L8C5 426 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 ABI3BPQ7Z7G0 1075 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 NRROSQ86YC3 692 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 HS3ST5Q8IZT8 346 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 FRMD1Q8N878 549 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 OR4E2Q8NGC2 313 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 ZFP90Q8TF47 636 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 MTERF3Q96E29 417 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 CA14Q9ULX7 337 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 VPS4AQ9UN37 437 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 TRBC2A0A5B9 178 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 NDUFS4O43181 175 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 OR6B1O95007 311 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 C6orf47O95873 294 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 ALPLP05186 524 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 NUDT7P0C024 238 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 BCL6P41182 706 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 SLC19A1P41440 591 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 LRRC74AQ0VAA2 488 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 KIAA0895LQ68EN5 471 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 UBE3DQ7Z6J8 389 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 AMIGO1Q86WK6 493 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 TSPAN14Q8NG11 270 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 GOT1L1Q8NHS2 421 aaPredicted RBP17.42■□□□□ 0.38
COL9A3-205ENST00000466192 LCN9Q8WX39 176 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 SDCCAG3Q96C92 435 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 DPH7Q9BTV6 452 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 AICDAQ9GZX7 198 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 SAMD4AQ9UPU9 718 aaKnown RBP17.42■□□□□ 0.38
COL9A3-205ENST00000466192 GMEB1Q9Y692 573 aa17.42■□□□□ 0.38
COL9A3-205ENST00000466192 PRAMEF26H0Y7S4 382 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 CAPN5O15484 640 aaPredicted RBP17.41■□□□□ 0.38
COL9A3-205ENST00000466192 GPR37L1O60883 481 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 CLEC3AO75596 197 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 SERPIND1P05546 499 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 IL1RNP18510 177 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 CCR5P51681 352 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 MAPK12P53778 367 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 CASP9P55211 416 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 ABATP80404 500 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 LRRC32Q14392 662 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 GAS6Q14393 721 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.41■□□□□ 0.382e-6■■■■□ 20.9
COL9A3-205ENST00000466192 ERICH5Q6P6B1 374 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 ZNF786Q8N393 782 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 TM4SF18Q96CE8 201 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 SLC6A16Q9GZN6 736 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 CHST8Q9H2A9 424 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 LMAN1LQ9HAT1 526 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 CD320Q9NPF0 282 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 TMEM184CQ9NVA4 438 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 TRNAU1APQ9NX07 287 aaKnown RBP17.41■□□□□ 0.38
COL9A3-205ENST00000466192 TAAR2Q9P1P5 351 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 ZNF282Q9UDV7 671 aaPredicted RBP17.41■□□□□ 0.38
COL9A3-205ENST00000466192 U3KQV3 271 aa17.41■□□□□ 0.38
COL9A3-205ENST00000466192 HAT1O14929 419 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 AXIN1O15169 862 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 PPM1DO15297 605 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 KDM1AO60341 852 aa17.4■□□□□ 0.38
COL9A3-205ENST00000466192 STATHP02808 62 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms