RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 ANXA8P13928 327 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 HOXB6P17509 224 aaKnown RBP13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 RPIAP49247 311 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 PRIM2P49643 509 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 SELENOWP63302 87 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 MRPL28Q13084 256 aaKnown RBP13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 TNK1Q13470 666 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 LRRC32Q14392 662 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 TOR1AIP1Q5JTV8 583 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 LCN1P1Q5VSP4 162 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 CCSAPQ6IQ19 270 aaPredicted RBP13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 ADNP2Q6IQ32 1131 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 ATAD1Q8NBU5 361 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 TESCQ96BS2 214 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 QRFPRQ96P65 431 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 TM9SF2Q99805 663 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 TXNL4BQ9NX01 149 aaKnown RBP13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 PLEKHB1Q9UF11 243 aaPredicted RBP13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 RIMKLBQ9ULI2 386 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 TMCC3Q9ULS5 477 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 SHOXO15266 292 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 FABP7O15540 132 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 NCR1O76036 304 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 AP2S1P53680 142 aaPredicted RBP13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 ATN1P54259 1190 aaPredicted RBP13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 BNC1Q01954 994 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 IL18Q14116 193 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 ARMC12Q5T9G4 340 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 ZNF767PQ75MW2 155 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 DENND1CQ8IV53 801 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 THEM5Q8N1Q8 247 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 ZFP41Q8N8Y5 198 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 SLC37A3Q8NCC5 494 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 OR6C4Q8NGE1 309 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 C9orf43Q8TAL5 461 aaPredicted RBP13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 C1GALT1C1Q96EU7 318 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 PSKH2Q96QS6 385 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 CDCP1Q9H5V8 836 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 CCSER2Q9H7U1 834 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 SH3BP4Q9P0V3 963 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 FNIP2Q9P278 1114 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 RABL2AQ9UBK7 228 aaPredicted RBP13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 ACSL6Q9UKU0 697 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 STUB1Q9UNE7 303 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 SLC22A14Q9Y267 594 aa13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 ZFP37Q9Y6Q3 630 aaPredicted RBP13.37□□□□□ -0.27
TGFBR3-204ENST00000465892 SNTNA6NMZ2 147 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 H3BN98 237 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 PRAMEF4O60810 478 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 AMD1P17707 334 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 HLA-DMAP28067 261 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 CSTF2P33240 577 aaKnown RBP eCLIP13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 NUDT1P36639 197 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 SOX9P48436 509 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 RGNQ15493 299 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 PRAMEF9Q5VWM5 478 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 FAM180BQ6P0A1 224 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 USP30Q70CQ3 517 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 CREB3L2Q70SY1 520 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 C16orf59Q7L2K0 433 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 OR4K1Q8NGD4 311 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 SLC25A46Q96AG3 418 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 WACQ9BTA9 647 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 LINC00597Q9H2U6 94 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 KLHL21Q9UJP4 597 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 PADI2Q9Y2J8 665 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 ISM1B1AKI9 464 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 GBAP04062 536 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 ARSBP15848 533 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 DGKAP23743 735 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 SLC6A4P31645 630 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 PCBP1Q15365 356 aaKnown RBP eCLIP13.36□□□□□ -0.273e-6■□□□□ 9.7
TGFBR3-204ENST00000465892 ZNF284Q2VY69 593 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 DDI2Q5TDH0 399 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 CDH24Q86UP0 819 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 SLC51BQ86UW2 128 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 PHC2Q8IXK0 858 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 CARNMT1Q8N4J0 409 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 OR5AK3PQ8NH89 298 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 FATE1Q969F0 183 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 PKP4Q99569 1192 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 C17orf62Q9BQA9 187 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 B3GAT2Q9NPZ5 323 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 ASIC5Q9NY37 505 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 ZNF224Q9NZL3 707 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 PCDHB11Q9Y5F2 797 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 PCP4L1A6NKN8 68 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 MYL12BO14950 172 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 HPGDSO60760 199 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 TRBC1P01850 177 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 ZNF30P17039 623 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 ZNF7P17097 686 aaPredicted RBP13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 MYL12AP19105 171 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 TNNI3P19429 210 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 TACR2P21452 398 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 HKDC1Q2TB90 917 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 ZNF772Q68DY9 489 aaPredicted RBP13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 CD300LGQ6UXG3 332 aa13.36□□□□□ -0.27
TGFBR3-204ENST00000465892 GPR156Q8NFN8 814 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms