RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 PRDM7Q9NQW5 492 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 LANCL2Q9NS86 450 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 C3orf18Q9UK00 162 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 MAN2B2Q9Y2E5 1009 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 STK38LQ9Y2H1 464 aa19.2■□□□□ 0.66
SKA3-205ENST00000465471 A0A1W2PQ72 361 aa19.19■□□□□ 0.66
SKA3-205ENST00000465471 MAGEB17A8MXT2 336 aa19.19■□□□□ 0.66
SKA3-205ENST00000465471 IDSB3KWA1 339 aa19.19■□□□□ 0.66
SKA3-205ENST00000465471 CHST10O43529 356 aa19.19■□□□□ 0.66
SKA3-205ENST00000465471 JRKO75564 520 aa19.19■□□□□ 0.66
SKA3-205ENST00000465471 TGFB1P01137 390 aa19.19■□□□□ 0.66
SKA3-205ENST00000465471 H2AFXP16104 143 aaPredicted RBP19.19■□□□□ 0.66
SKA3-205ENST00000465471 ETV4P43268 484 aa19.19■□□□□ 0.66
SKA3-205ENST00000465471 ARFIP1P53367 373 aa19.19■□□□□ 0.66
SKA3-205ENST00000465471 PLA2G16P53816 162 aa19.19■□□□□ 0.66
SKA3-205ENST00000465471 OLR1P78380 273 aa19.19■□□□□ 0.66
SKA3-205ENST00000465471 BTN3A2P78410 334 aa19.19■□□□□ 0.66
SKA3-205ENST00000465471 DDX39BQ13838 428 aaKnown RBP19.19■□□□□ 0.66
SKA3-205ENST00000465471 CASP8Q14790 479 aa19.19■□□□□ 0.66
SKA3-205ENST00000465471 CHSY3Q70JA7 882 aa19.19■□□□□ 0.66
SKA3-205ENST00000465471 PRSS58Q8IYP2 241 aa19.19■□□□□ 0.66
SKA3-205ENST00000465471 CA13Q8N1Q1 262 aa19.19■□□□□ 0.66
SKA3-205ENST00000465471 CCDC63Q8NA47 563 aa19.19■□□□□ 0.66
SKA3-205ENST00000465471 SRFBP1Q8NEF9 429 aaKnown RBP19.19■□□□□ 0.66
SKA3-205ENST00000465471 APOBEC4Q8WW27 367 aaKnown RBP19.19■□□□□ 0.66
SKA3-205ENST00000465471 KCNC2Q96PR1 638 aa19.19■□□□□ 0.66
SKA3-205ENST00000465471 YIPF2Q9BWQ6 316 aa19.19■□□□□ 0.66
SKA3-205ENST00000465471 NPLQ9BXD5 320 aaPredicted RBP19.19■□□□□ 0.66
SKA3-205ENST00000465471 MED13Q9UHV7 2174 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 A0A088AWK7 358 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 A0A0G2JN53 185 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 OR4F21O95013 312 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 ETHE1O95571 254 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 ZNF10P21506 573 aaPredicted RBP19.18■□□□□ 0.66
SKA3-205ENST00000465471 ARL1P40616 181 aaPredicted RBP19.18■□□□□ 0.66
SKA3-205ENST00000465471 NAGLUP54802 743 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 PKNOX1P55347 436 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 RPS13P62277 151 aaKnown RBP19.18■□□□□ 0.66
SKA3-205ENST00000465471 PHEXP78562 749 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 TGM3Q08188 693 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 CUL3Q13618 768 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 ZNF793Q6ZN11 406 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 GPRIN3Q6ZVF9 776 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 C10orf107Q8IVU9 208 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 AGAP11Q8TF27 550 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 PEX11GQ96HA9 241 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 FAR2Q96K12 515 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 SERINC2Q96SA4 455 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 MESP1Q9BRJ9 268 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 TBCDQ9BTW9 1192 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 VN1R1Q9GZP7 353 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 OR51B5Q9H339 312 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 P4HTMQ9NXG6 502 aa19.18■□□□□ 0.66
SKA3-205ENST00000465471 AGPSO00116 658 aa19.17■□□□□ 0.66
SKA3-205ENST00000465471 UBFD1O14562 309 aaKnown RBP19.17■□□□□ 0.66
SKA3-205ENST00000465471 PCDH17O14917 1159 aa19.17■□□□□ 0.66
SKA3-205ENST00000465471 ATXN7O15265 892 aaPredicted RBP19.17■□□□□ 0.66
SKA3-205ENST00000465471 ESRRBO95718 433 aa19.17■□□□□ 0.66
SKA3-205ENST00000465471 FHP07954 510 aa19.17■□□□□ 0.66
SKA3-205ENST00000465471 PTX3P26022 381 aaPredicted RBP19.17■□□□□ 0.66
SKA3-205ENST00000465471 TSFMP43897 325 aaKnown RBP19.17■□□□□ 0.66
SKA3-205ENST00000465471 CCR10P46092 362 aa19.17■□□□□ 0.66
SKA3-205ENST00000465471 NEK2P51955 445 aa19.17■□□□□ 0.66
SKA3-205ENST00000465471 EMP2P54851 167 aa19.17■□□□□ 0.66
SKA3-205ENST00000465471 MTTPP55157 894 aa19.17■□□□□ 0.66
SKA3-205ENST00000465471 RUNX2Q13950 521 aa19.17■□□□□ 0.66
SKA3-205ENST00000465471 FAM219BQ5XKK7 198 aa19.17■□□□□ 0.66
SKA3-205ENST00000465471 CPZQ66K79 652 aa19.17■□□□□ 0.66
SKA3-205ENST00000465471 TMEM205Q6UW68 189 aa19.17■□□□□ 0.66
SKA3-205ENST00000465471 KIRREL2Q6UWL6 708 aa19.17■□□□□ 0.66
SKA3-205ENST00000465471 CCNYL1Q8N7R7 359 aa19.17■□□□□ 0.66
SKA3-205ENST00000465471 TMEM102Q8N9M5 508 aaPredicted RBP19.17■□□□□ 0.66
SKA3-205ENST00000465471 LSM14AQ8ND56 463 aaKnown RBP19.17■□□□□ 0.66
SKA3-205ENST00000465471 TBC1D20Q96BZ9 403 aa19.17■□□□□ 0.66
SKA3-205ENST00000465471 ZNF717Q9BY31 904 aaPredicted RBP19.17■□□□□ 0.66
SKA3-205ENST00000465471 SLC29A3Q9BZD2 475 aa19.17■□□□□ 0.66
SKA3-205ENST00000465471 ROGDIQ9GZN7 287 aa19.17■□□□□ 0.66
SKA3-205ENST00000465471 MKL2Q9ULH7 1088 aa19.17■□□□□ 0.66
SKA3-205ENST00000465471 BSNQ9UPA5 3926 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 LOC102723996A0A087X1L8 192 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 ARGFXA6NJG6 315 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 H3BQF6 201 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 PLPP1O14494 284 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 B3GALT2O43825 422 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 TRIM13O60858 407 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 SEMA3DO95025 777 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 ENO1P06733 434 aaKnown RBP19.16■□□□□ 0.66
SKA3-205ENST00000465471 HEXBP07686 556 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 MYZAPP0CAP1 466 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 RNH1P13489 461 aaKnown RBP19.16■□□□□ 0.66
SKA3-205ENST00000465471 ATP5A1P25705 553 aaKnown RBP19.16■□□□□ 0.66
SKA3-205ENST00000465471 CERS1P27544 350 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 ALDH3A1P30838 453 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 POLE2P56282 527 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 RHAGQ02094 409 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 IFT88Q13099 833 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 TUBB8Q3ZCM7 444 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 CDYL2Q8N8U2 506 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 OR11G2Q8NGC1 345 aa19.16■□□□□ 0.66
SKA3-205ENST00000465471 GATA5Q9BWX5 397 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms