RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 CREB3L4Q8TEY5 395 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 TM4SF19Q96DZ7 209 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 PPP3R2Q96LZ3 170 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 SLC52A3Q9NQ40 469 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 TMEM181Q9P2C4 612 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 GIMAP2Q9UG22 337 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 PLCL2Q9UPR0 1127 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 MDC1Q14676 2089 aaKnown RBP16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 MAGEB17A8MXT2 336 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 SLC28A1O00337 649 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 FOXE1O00358 373 aaPredicted RBP16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 NVLO15381 856 aaKnown RBP16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 SRPX2O60687 465 aaPredicted RBP16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 STATHP02808 62 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 MSL3P1P0C860 447 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 CSTF2P33240 577 aaKnown RBP eCLIP16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 DIO3P55073 304 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 VSX2P58304 361 aaPredicted RBP16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 TRAP1Q12931 704 aaKnown RBP16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 RCAN2Q14206 197 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 SAMD4BQ5PRF9 694 aaKnown RBP16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 C10orf62Q5T681 223 aaPredicted RBP16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 HES3Q5TGS1 186 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 TRIM46Q7Z4K8 759 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 TRPV3Q8NET8 790 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 SLC26A7Q8TE54 656 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 NRG4Q8WWG1 115 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 SLC13A3Q8WWT9 602 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 MACROD1Q9BQ69 325 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 GPATCH1Q9BRR8 931 aaKnown RBP16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 ADGRE2Q9UHX3 823 aa16.12■□□□□ 0.17
EXOSC3-203ENST00000465229 SPTBN4Q9H254 2564 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 DCHS1Q96JQ0 3298 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 A0A1W2PP18 115 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 DCDC2BA2VCK2 349 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 NR5A2O00482 541 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 ACOT8O14734 319 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 LSM1O15116 133 aaKnown RBP16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 ANGPT2O15123 496 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 CSO75390 466 aaKnown RBP16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 CLEC3AO75596 197 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 SERPIND1P05546 499 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 PCSK2P16519 638 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 SDHBP21912 280 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 GSTM2P28161 218 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 SESN3P58005 492 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 RPS13P62277 151 aaKnown RBP16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 ZNF33BQ06732 778 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 FLOT2Q14254 428 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 GPR19Q15760 415 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 ASPGQ86U10 573 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 EFCAB3Q8N7B9 438 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 AGBL5Q8NDL9 886 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 RERGQ96A58 199 aaPredicted RBP16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 ASB9Q96DX5 294 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 SPDL1Q96EA4 605 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 ZNF285Q96NJ3 590 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 DMRT3Q9NQL9 472 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 GID8Q9NWU2 228 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 OCIAD1Q9NX40 245 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 SIDT1Q9NXL6 827 aaKnown RBP16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 CD300AQ9UGN4 299 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 CLCA2Q9UQC9 943 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 CCL27Q9Y4X3 112 aa16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 COL27A1Q8IZC6 1860 aaPredicted RBP16.11■□□□□ 0.17
EXOSC3-203ENST00000465229 SERTM1A2A2V5 107 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 FAM234BA2RU67 622 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 TMX2-CTNND1H3BSU7 103 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 P2RX6O15547 441 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 RGS14O43566 566 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 SLC22A3O75751 556 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 ETHE1O95571 254 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 TGFB1P01137 390 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 NPPAP01160 153 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 EIF2S1P05198 315 aaKnown RBP16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 CAPN3P20807 821 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 SERPINB1P30740 379 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 KCNK10P57789 538 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 HYAL2Q12891 473 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 MAD2L1Q13257 205 aaPredicted RBP16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 PWP1Q13610 501 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 TRIM25Q14258 630 aaKnown RBP16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 TLDC1Q6P9B6 456 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 RETREG3Q86VR2 466 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 FNDC5Q8NAU1 212 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 DNAJC9Q8WXX5 260 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 FAM122AQ96E09 287 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 DEPDC7Q96QD5 511 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 ACPTQ9BZG2 426 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 BRF2Q9HAW0 419 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 FGF21Q9NSA1 209 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 STARD5Q9NSY2 213 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 NMRK1Q9NWW6 199 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 ASIC5Q9NY37 505 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 ADA2Q9NZK5 511 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 MAP10Q9P2G4 905 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 ABCD2Q9UBJ2 740 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 PPT2Q9UMR5 302 aa16.1■□□□□ 0.17
EXOSC3-203ENST00000465229 LRIT2A6NDA9 550 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 TMEM150CB9EJG8 249 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms