RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 HNMTP50135 292 aa21.27■■□□□ 1
USP42-205ENST00000465073 TERF2Q15554 542 aa21.27■■□□□ 1
USP42-205ENST00000465073 FGD2Q7Z6J4 655 aa21.27■■□□□ 1
USP42-205ENST00000465073 APCDD1LQ8NCL9 501 aa21.27■■□□□ 1
USP42-205ENST00000465073 DMRTA2Q96SC8 542 aa21.27■■□□□ 1
USP42-205ENST00000465073 SPOCK3Q9BQ16 436 aa21.27■■□□□ 1
USP42-205ENST00000465073 TEX264Q9Y6I9 313 aa21.27■■□□□ 1
USP42-205ENST00000465073 GTF3C1Q12789 2109 aa21.27■■□□□ 1
USP42-205ENST00000465073 CDC7O00311 574 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 ADAM10O14672 748 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 ZNHIT1O43257 154 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 H2AFYO75367 372 aaKnown RBP21.26■□□□□ 0.99
USP42-205ENST00000465073 MEOX1P50221 254 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 CLCN2P51788 898 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 BTN3A2P78410 334 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 NCCRP1Q6ZVX7 275 aaPredicted RBP21.26■□□□□ 0.99
USP42-205ENST00000465073 SULF2Q8IWU5 870 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 TTLQ8NG68 377 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 FAR2Q96K12 515 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 EGFL8Q99944 293 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 NPLQ9BXD5 320 aaPredicted RBP21.26■□□□□ 0.99
USP42-205ENST00000465073 OARD1Q9Y530 152 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 POLQO75417 2590 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 TRBV11-1A0A0K0K1C0 115 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 NPEPPSL1A6NEC2 478 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 TFECO14948 347 aaPredicted RBP21.26■□□□□ 0.99
USP42-205ENST00000465073 MYO1DO94832 1006 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 GNAZP19086 355 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 SAT1P21673 171 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 PTGER1P34995 402 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 C3P1Q6ZMU1 363 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 SYDE1Q6ZW31 735 aaPredicted RBP21.26■□□□□ 0.99
USP42-205ENST00000465073 TMEM156Q8N614 296 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 GAL3ST3Q96A11 431 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 PWWP2AQ96N64 755 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 AICDAQ9GZX7 198 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 PPT2Q9UMR5 302 aa21.26■□□□□ 0.99
USP42-205ENST00000465073 PPIEQ9UNP9 301 aaKnown RBP21.26■□□□□ 0.99
USP42-205ENST00000465073 C4orf51C9J302 202 aa21.25■□□□□ 0.99
USP42-205ENST00000465073 PEX1O43933 1283 aa21.25■□□□□ 0.99
USP42-205ENST00000465073 C1GALT1C1LP0DN25 315 aa21.25■□□□□ 0.99
USP42-205ENST00000465073 PTGS2P35354 604 aa21.25■□□□□ 0.99
USP42-205ENST00000465073 MGAT5Q09328 741 aa21.25■□□□□ 0.99
USP42-205ENST00000465073 SLCO4C1Q6ZQN7 724 aa21.25■□□□□ 0.99
USP42-205ENST00000465073 ZC3HC1Q86WB0 502 aaKnown RBP21.25■□□□□ 0.99
USP42-205ENST00000465073 CEP97Q8IW35 865 aa21.25■□□□□ 0.99
USP42-205ENST00000465073 SCUBE1Q8IWY4 988 aa21.25■□□□□ 0.99
USP42-205ENST00000465073 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.25■□□□□ 0.99
USP42-205ENST00000465073 CYP4Z2PQ8N1L4 340 aa21.25■□□□□ 0.99
USP42-205ENST00000465073 CA5BP1Q8WTZ4 195 aa21.25■□□□□ 0.99
USP42-205ENST00000465073 C14orf79Q96F83 325 aa21.25■□□□□ 0.99
USP42-205ENST00000465073 PDLIM2Q96JY6 352 aa21.25■□□□□ 0.99
USP42-205ENST00000465073 WDR83Q9BRX9 315 aaKnown RBP21.25■□□□□ 0.99
USP42-205ENST00000465073 COQ3Q9NZJ6 369 aa21.25■□□□□ 0.99
USP42-205ENST00000465073 FBXW2Q9UKT8 454 aa21.25■□□□□ 0.99
USP42-205ENST00000465073 PSAT1Q9Y617 370 aa21.25■□□□□ 0.99
USP42-205ENST00000465073 CCDC168Q8NDH2 2452 aa21.25■□□□□ 0.99
USP42-205ENST00000465073 CACNA1CQ13936 2221 aa21.24■□□□□ 0.99
USP42-205ENST00000465073 ADGRG4Q8IZF6 3080 aa21.24■□□□□ 0.99
USP42-205ENST00000465073 CLDN4O14493 209 aa21.24■□□□□ 0.99
USP42-205ENST00000465073 ITGA10O75578 1167 aa21.24■□□□□ 0.99
USP42-205ENST00000465073 GSTM2P28161 218 aa21.24■□□□□ 0.99
USP42-205ENST00000465073 ARL4CP56559 192 aa21.24■□□□□ 0.99
USP42-205ENST00000465073 HSD17B7P56937 341 aa21.24■□□□□ 0.99
USP42-205ENST00000465073 TMIGD1Q6UXZ0 262 aa21.24■□□□□ 0.99
USP42-205ENST00000465073 ADAMTSL2Q86TH1 951 aa21.24■□□□□ 0.99
USP42-205ENST00000465073 KLHDC8AQ8IYD2 350 aa21.24■□□□□ 0.99
USP42-205ENST00000465073 ZFP62Q8NB50 900 aaPredicted RBP21.24■□□□□ 0.99
USP42-205ENST00000465073 C16orf52Q8NHV5 167 aa21.24■□□□□ 0.99
USP42-205ENST00000465073 FAM57AQ8TBR7 257 aa21.24■□□□□ 0.99
USP42-205ENST00000465073 SDCCAG3Q96C92 435 aa21.24■□□□□ 0.99
USP42-205ENST00000465073 VMP1Q96GC9 406 aa21.24■□□□□ 0.99
USP42-205ENST00000465073 SEC16BQ96JE7 1060 aa21.24■□□□□ 0.99
USP42-205ENST00000465073 PNO1Q9NRX1 252 aaKnown RBP21.24■□□□□ 0.99
USP42-205ENST00000465073 CTNNAL1Q9UBT7 734 aa21.24■□□□□ 0.99
USP42-205ENST00000465073 F8P00451 2351 aa21.23■□□□□ 0.99
USP42-205ENST00000465073 A0A088AWK7 358 aa21.23■□□□□ 0.99
USP42-205ENST00000465073 A0A1B0GTH9 108 aa21.23■□□□□ 0.99
USP42-205ENST00000465073 FAM95CA0A1B0GW59 222 aa21.23■□□□□ 0.99
USP42-205ENST00000465073 LRIT2A6NDA9 550 aa21.23■□□□□ 0.99
USP42-205ENST00000465073 ZSCAN12O43309 604 aa21.23■□□□□ 0.99
USP42-205ENST00000465073 WDR47O94967 919 aa21.23■□□□□ 0.99
USP42-205ENST00000465073 TCP1P17987 556 aaKnown RBP21.23■□□□□ 0.99
USP42-205ENST00000465073 CAPN3P20807 821 aa21.23■□□□□ 0.99
USP42-205ENST00000465073 ZNF10P21506 573 aaPredicted RBP21.23■□□□□ 0.99
USP42-205ENST00000465073 TAS2R39P59534 338 aa21.23■□□□□ 0.99
USP42-205ENST00000465073 RUNX2Q13950 521 aa21.23■□□□□ 0.99
USP42-205ENST00000465073 FRA10AC1Q70Z53 315 aa21.23■□□□□ 0.99
USP42-205ENST00000465073 KRT78Q8N1N4 520 aa21.23■□□□□ 0.99
USP42-205ENST00000465073 ACBD4Q8NC06 268 aa21.23■□□□□ 0.99
USP42-205ENST00000465073 MS4A6EQ96DS6 147 aa21.23■□□□□ 0.99
USP42-205ENST00000465073 VPS39Q96JC1 886 aa21.23■□□□□ 0.99
USP42-205ENST00000465073 CCDC77Q9BR77 488 aa21.23■□□□□ 0.99
USP42-205ENST00000465073 PITHD1Q9GZP4 211 aaPredicted RBP21.23■□□□□ 0.99
USP42-205ENST00000465073 ENKD1Q9H0I2 346 aa21.23■□□□□ 0.99
USP42-205ENST00000465073 PRTFDC1Q9NRG1 225 aa21.23■□□□□ 0.99
USP42-205ENST00000465073 YARS2Q9Y2Z4 477 aaKnown RBP21.23■□□□□ 0.99
USP42-205ENST00000465073 CSMD2Q7Z408 3487 aa21.22■□□□□ 0.99
USP42-205ENST00000465073 SYNDIG1LA6NDD5 238 aa21.22■□□□□ 0.99
USP42-205ENST00000465073 ERI3O43414 337 aaKnown RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms