RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 ANXA9O76027 345 aa8.68□□□□□ -1.02
APP-213ENST00000464867 GLSO94925 669 aaPredicted RBP8.68□□□□□ -1.02
APP-213ENST00000464867 WNT11O96014 354 aa8.68□□□□□ -1.02
APP-213ENST00000464867 EZRP15311 586 aaKnown RBP8.68□□□□□ -1.02
APP-213ENST00000464867 PAX1P15863 534 aa8.68□□□□□ -1.02
APP-213ENST00000464867 CNR1P21554 472 aa8.68□□□□□ -1.02
APP-213ENST00000464867 KDELR1P24390 212 aa8.68□□□□□ -1.02
APP-213ENST00000464867 CTSSP25774 331 aa8.68□□□□□ -1.02
APP-213ENST00000464867 BCL6P41182 706 aa8.68□□□□□ -1.02
APP-213ENST00000464867 CLCN2P51788 898 aa8.68□□□□□ -1.02
APP-213ENST00000464867 RHAGQ02094 409 aa8.68□□□□□ -1.02
APP-213ENST00000464867 GRB7Q14451 532 aa8.68□□□□□ -1.02
APP-213ENST00000464867 ITIH4Q14624 930 aa8.68□□□□□ -1.02
APP-213ENST00000464867 MSMPQ1L6U9 139 aa8.68□□□□□ -1.02
APP-213ENST00000464867 TYSND1Q2T9J0 566 aa8.68□□□□□ -1.02
APP-213ENST00000464867 ODF2Q5BJF6 829 aa8.68□□□□□ -1.02
APP-213ENST00000464867 C12orf54Q6X4T0 127 aa8.68□□□□□ -1.02
APP-213ENST00000464867 KIAA0408Q6ZU52 694 aa8.68□□□□□ -1.02
APP-213ENST00000464867 SEM1Q6ZVN7 128 aa8.68□□□□□ -1.02
APP-213ENST00000464867 ABHD13Q7L211 337 aa8.68□□□□□ -1.02
APP-213ENST00000464867 ADCK2Q7Z695 626 aa8.68□□□□□ -1.02
APP-213ENST00000464867 CAND1Q86VP6 1230 aaKnown RBP8.68□□□□□ -1.02
APP-213ENST00000464867 LIX1Q8N485 282 aa8.68□□□□□ -1.02
APP-213ENST00000464867 PPM1NQ8N819 430 aa8.68□□□□□ -1.02
APP-213ENST00000464867 HMGCLL1Q8TB92 370 aa8.68□□□□□ -1.02
APP-213ENST00000464867 MAGEC3Q8TD91 643 aa8.68□□□□□ -1.02
APP-213ENST00000464867 SKA2Q8WVK7 121 aaPredicted RBP8.68□□□□□ -1.02
APP-213ENST00000464867 TFB1MQ8WVM0 346 aaKnown RBP8.68□□□□□ -1.02
APP-213ENST00000464867 ASB15Q8WXK1 588 aa8.68□□□□□ -1.02
APP-213ENST00000464867 SYN2Q92777 582 aaPredicted RBP8.68□□□□□ -1.02
APP-213ENST00000464867 PIK3IP1Q96FE7 263 aa8.68□□□□□ -1.02
APP-213ENST00000464867 OXNAD1Q96HP4 312 aaPredicted RBP8.68□□□□□ -1.02
APP-213ENST00000464867 OLFM3Q96PB7 478 aa8.68□□□□□ -1.02
APP-213ENST00000464867 ALS2CR12Q96Q35 445 aa8.68□□□□□ -1.02
APP-213ENST00000464867 OR2A5Q96R48 311 aa8.68□□□□□ -1.02
APP-213ENST00000464867 OR1F2PQ96R84 312 aa8.68□□□□□ -1.02
APP-213ENST00000464867 VAT1Q99536 393 aa8.68□□□□□ -1.02
APP-213ENST00000464867 TTC1Q99614 292 aa8.68□□□□□ -1.02
APP-213ENST00000464867 CCDC77Q9BR77 488 aa8.68□□□□□ -1.02
APP-213ENST00000464867 SYT11Q9BT88 431 aa8.68□□□□□ -1.02
APP-213ENST00000464867 ANKHQ9HCJ1 492 aa8.68□□□□□ -1.02
APP-213ENST00000464867 C6orf203Q9P0P8 240 aaPredicted RBP8.68□□□□□ -1.02
APP-213ENST00000464867 PCYOX1Q9UHG3 505 aa8.68□□□□□ -1.02
APP-213ENST00000464867 RSPH14Q9UHP6 348 aa8.68□□□□□ -1.02
APP-213ENST00000464867 YARS2Q9Y2Z4 477 aaKnown RBP8.68□□□□□ -1.02
APP-213ENST00000464867 TRBV11-1A0A0K0K1C0 115 aa8.67□□□□□ -1.02
APP-213ENST00000464867 LRRD1A4D1F6 860 aa8.67□□□□□ -1.02
APP-213ENST00000464867 SGK494L7N484 410 aa8.67□□□□□ -1.02
APP-213ENST00000464867 CCL22O00626 93 aa8.67□□□□□ -1.02
APP-213ENST00000464867 EIF1AYO14602 144 aaKnown RBP8.67□□□□□ -1.02
APP-213ENST00000464867 EIF4EBP3O60516 100 aaPredicted RBP8.67□□□□□ -1.02
APP-213ENST00000464867 TMCC2O75069 709 aa8.67□□□□□ -1.02
APP-213ENST00000464867 SOX30O94993 753 aa8.67□□□□□ -1.02
APP-213ENST00000464867 CCNDBP1O95273 360 aa8.67□□□□□ -1.02
APP-213ENST00000464867 JAK1P23458 1154 aa8.67□□□□□ -1.02
APP-213ENST00000464867 RPA3P35244 121 aaPredicted RBP8.67□□□□□ -1.02
APP-213ENST00000464867 AGFG1P52594 562 aaKnown RBP8.67□□□□□ -1.02
APP-213ENST00000464867 ZNF136P52737 540 aa8.67□□□□□ -1.02
APP-213ENST00000464867 ZNF140P52738 457 aaPredicted RBP8.67□□□□□ -1.02
APP-213ENST00000464867 GEMP55040 296 aa8.67□□□□□ -1.02
APP-213ENST00000464867 RELAQ04206 551 aa8.67□□□□□ -1.02
APP-213ENST00000464867 TSTA3Q13630 321 aaPredicted RBP8.67□□□□□ -1.02
APP-213ENST00000464867 KRT31Q15323 416 aa8.67□□□□□ -1.02
APP-213ENST00000464867 TMED2Q15363 201 aa8.67□□□□□ -1.02
APP-213ENST00000464867 ETFDHQ16134 617 aa8.67□□□□□ -1.02
APP-213ENST00000464867 PDLIM3Q53GG5 364 aaPredicted RBP8.67□□□□□ -1.02
APP-213ENST00000464867 LCE3BQ5TA77 95 aa8.67□□□□□ -1.02
APP-213ENST00000464867 SLC9A4Q6AI14 798 aa8.67□□□□□ -1.02
APP-213ENST00000464867 POMZP3Q6PJE2 187 aa8.67□□□□□ -1.02
APP-213ENST00000464867 PACS1Q6VY07 963 aa8.67□□□□□ -1.02
APP-213ENST00000464867 FAM47EQ6ZV65 393 aa8.67□□□□□ -1.02
APP-213ENST00000464867 OTOAQ7RTW8 1153 aa8.67□□□□□ -1.02
APP-213ENST00000464867 SLC26A11Q86WA9 606 aa8.67□□□□□ -1.02
APP-213ENST00000464867 ARHGEF39Q8N4T4 335 aa8.67□□□□□ -1.02
APP-213ENST00000464867 TSLPQ969D9 159 aa8.67□□□□□ -1.02
APP-213ENST00000464867 LRRC45Q96CN5 670 aa8.67□□□□□ -1.02
APP-213ENST00000464867 PEX11GQ96HA9 241 aa8.67□□□□□ -1.02
APP-213ENST00000464867 FOPNLQ96NB1 174 aa8.67□□□□□ -1.02
APP-213ENST00000464867 EBNA1BP2Q99848 306 aaKnown RBP8.67□□□□□ -1.02
APP-213ENST00000464867 HAUS4Q9H6D7 363 aa8.67□□□□□ -1.02
APP-213ENST00000464867 SAMD15Q9P1V8 674 aa8.67□□□□□ -1.02
APP-213ENST00000464867 TTC7AQ9ULT0 858 aaPredicted RBP8.67□□□□□ -1.02
APP-213ENST00000464867 PRSS21Q9Y6M0 314 aa8.67□□□□□ -1.02
APP-213ENST00000464867 ROS1P08922 2347 aa8.66□□□□□ -1.02
APP-213ENST00000464867 SAGE2PA6NJ88 616 aa8.66□□□□□ -1.02
APP-213ENST00000464867 G3V3Y1 287 aa8.66□□□□□ -1.02
APP-213ENST00000464867 IL18BPO95998 194 aa8.66□□□□□ -1.02
APP-213ENST00000464867 CELA3AP09093 270 aa8.66□□□□□ -1.02
APP-213ENST00000464867 IL1RNP18510 177 aa8.66□□□□□ -1.02
APP-213ENST00000464867 IDUAP35475 653 aa8.66□□□□□ -1.02
APP-213ENST00000464867 CCNFP41002 786 aa8.66□□□□□ -1.02
APP-213ENST00000464867 ADARP55265 1226 aaKnown RBP8.66□□□□□ -1.02
APP-213ENST00000464867 DYNLT1P63172 113 aa8.66□□□□□ -1.02
APP-213ENST00000464867 OCRLQ01968 901 aa8.66□□□□□ -1.02
APP-213ENST00000464867 UBXN1Q04323 297 aa8.66□□□□□ -1.02
APP-213ENST00000464867 WASHC5Q12768 1159 aa8.66□□□□□ -1.02
APP-213ENST00000464867 CAPRIN1Q14444 709 aaKnown RBP8.66□□□□□ -1.02
APP-213ENST00000464867 ACSF3Q4G176 576 aaPredicted RBP8.66□□□□□ -1.02
APP-213ENST00000464867 NPNTQ6UXI9 565 aa8.66□□□□□ -1.02
APP-213ENST00000464867 IL20RBQ6UXL0 311 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms