RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 RPS13P62277 151 aaKnown RBP13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 LCP2Q13094 533 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 ATP1A4Q13733 1029 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 TNFAIP8L3Q5GJ75 292 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 CFAP157Q5JU67 520 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 C10orf62Q5T681 223 aaPredicted RBP13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 DEPDC1Q5TB30 811 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 KHDRBS2Q5VWX1 349 aaKnown RBP13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 LIPMQ5VYY2 423 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 FRG2Q64ET8 278 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 LETMD1Q6P1Q0 360 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 MRGPREQ86SM8 312 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 EXOC3L1Q86VI1 746 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 C10orf107Q8IVU9 208 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 MYRIPQ8NFW9 859 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 MTFMTQ96DP5 389 aaKnown RBP13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 PGM2Q96G03 612 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 WBP1Q96G27 269 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 QRFPRQ96P65 431 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 KCNC2Q96PR1 638 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 FRG2BQ96QU4 278 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 OR1F2PQ96R84 312 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 ZNF382Q96SR6 550 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 CENPKQ9BS16 269 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 TBCDQ9BTW9 1192 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 NPLQ9BXD5 320 aaPredicted RBP13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 OR51B5Q9H339 312 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 GSTO2Q9H4Y5 243 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 PRDM7Q9NQW5 492 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 P4HTMQ9NXG6 502 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 SLC17A7Q9P2U7 560 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 TRPS1Q9UHF7 1281 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 ZNF225Q9UK10 706 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 MKL2Q9ULH7 1088 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 STK38LQ9Y2H1 464 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 HS3ST3B1Q9Y662 390 aa13.71□□□□□ -0.21
SQSTM1-205ENST00000464493 ARGFXA6NJG6 315 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 AGPSO00116 658 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 SAP18O00422 153 aaKnown RBP13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 B3GALT2O43825 422 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 TRIM13O60858 407 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 OR4F21O95013 312 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 FHP07954 510 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 MYZAPP0CAP1 466 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 RRADP55042 308 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 MTTPP55157 894 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 PKNOX1P55347 436 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 IFT88Q13099 833 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 CASP8Q14790 479 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 PCLAFQ15004 111 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 AP5B1Q2VPB7 878 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 MINDY4Q4G0A6 757 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 MFSD4BQ5TF39 518 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 KIRREL2Q6UWL6 708 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 GPRIN3Q6ZVF9 776 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 MED25Q71SY5 747 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 UBE3DQ7Z6J8 389 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 APLFQ8IW19 511 aaPredicted RBP13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 CA13Q8N1Q1 262 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 TMEM102Q8N9M5 508 aaPredicted RBP13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 RGMAQ96B86 450 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 TBC1D20Q96BZ9 403 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 VPS50Q96JG6 964 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 FER1L6-AS2Q96M78 137 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 SERINC2Q96SA4 455 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 ROGDIQ9GZN7 287 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 ING2Q9H160 280 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 ELOVL6Q9H5J4 265 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 COPS7BQ9H9Q2 264 aaPredicted RBP13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 SSU72Q9NP77 194 aaKnown RBP13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 PPT2Q9UMR5 302 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 SNX6Q9UNH7 406 aa13.7□□□□□ -0.22
SQSTM1-205ENST00000464493 SCN2AQ99250 2005 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 FAM208BQ5VWN6 2430 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 PSMD12O00232 456 aaPredicted RBP13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 SOCS6O14544 535 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 PCDH17O14917 1159 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 ALOX12BO75342 701 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 ESRRBO95718 433 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 CYC1P08574 325 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 FAM87AP0C7U9 286 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 RNH1P13489 461 aaKnown RBP13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 JAK1P23458 1154 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 ATP5A1P25705 553 aaKnown RBP13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 ALDH3A1P30838 453 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 RAP1GDS1P52306 607 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 ARFIP1P53367 373 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 POLE2P56282 527 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 ASPHQ12797 758 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 CUL3Q13618 768 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 RUNX2Q13950 521 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 SGO1Q5FBB7 561 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 FAAH2Q6GMR7 532 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 PCSK4Q6UW60 755 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 FRMD7Q6ZUT3 714 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 CDYL2Q8N8U2 506 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 METTL6Q8TCB7 284 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 METTL21AQ8WXB1 218 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 RBCK1Q9BYM8 510 aa13.69□□□□□ -0.22
SQSTM1-205ENST00000464493 VN1R1Q9GZP7 353 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms