RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 CCR1P32246 355 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 GALK2Q01415 458 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 SCGB2A2Q13296 93 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 PLD1Q13393 1074 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 PDE7AQ13946 482 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 CCDC57Q2TAC2 916 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 CTU2Q2VPK5 515 aaKnown RBP3.6□□□□□ -1.83
ITGB1-208ENST00000464001 ZNF789Q5FWF6 425 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 SULT1C3Q6IMI6 304 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 ARID3BQ8IVW6 561 aaPredicted RBP3.6□□□□□ -1.83
ITGB1-208ENST00000464001 ZNF679Q8IYX0 411 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 CRYBG2Q8N1P7 616 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 PDCL2Q8N4E4 241 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 DNAJC22Q8N4W6 341 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 ANKRD13CQ8N6S4 541 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 EIF1ADQ8N9N8 165 aaKnown RBP3.6□□□□□ -1.83
ITGB1-208ENST00000464001 MAGED4Q96JG8 741 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 TPPP3Q9BW30 176 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 NFKBIZQ9BYH8 718 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 RAB17Q9H0T7 212 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 CARD9Q9H257 536 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 SRD5A3Q9H8P0 318 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 LMAN1LQ9HAT1 526 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 RNPEPL1Q9HAU8 725 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 GPN1Q9HCN4 374 aaPredicted RBP3.6□□□□□ -1.83
ITGB1-208ENST00000464001 FLRT3Q9NZU0 649 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 LARSQ9P2J5 1176 aaKnown RBP3.6□□□□□ -1.83
ITGB1-208ENST00000464001 IL17BQ9UHF5 180 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 SLC24A2Q9UI40 661 aa3.6□□□□□ -1.83
ITGB1-208ENST00000464001 ASTN2O75129 1339 aaPredicted RBP3.6□□□□□ -1.83
ITGB1-208ENST00000464001 TRBV2A0A0J9YWF9 115 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 TMEM8BA6NDV4 472 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 ARHGAP42A6NI28 874 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 E2F3O00716 465 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 CTAGE5O15320 804 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 GJA1P17302 382 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 PSMB4P28070 264 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 CCND3P30281 292 aaPredicted RBP3.59□□□□□ -1.83
ITGB1-208ENST00000464001 STIP1P31948 543 aaKnown RBP3.59□□□□□ -1.83
ITGB1-208ENST00000464001 GMPSP49915 693 aaPredicted RBP3.59□□□□□ -1.83
ITGB1-208ENST00000464001 ETV1P50549 477 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 ARSEP51690 589 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 GPR143P51810 404 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 SRP54P61011 504 aaKnown RBP3.59□□□□□ -1.83
ITGB1-208ENST00000464001 PPP2R2BQ00005 443 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 SP3Q02447 781 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 MAP2K1Q02750 393 aaPredicted RBP3.59□□□□□ -1.83
ITGB1-208ENST00000464001 SNTB2Q13425 540 aaKnown RBP3.59□□□□□ -1.83
ITGB1-208ENST00000464001 DDX39BQ13838 428 aaKnown RBP3.59□□□□□ -1.83
ITGB1-208ENST00000464001 USH1GQ495M9 461 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 NADK2Q4G0N4 442 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 CCDC152Q4G0S7 254 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 XKR6Q5GH73 641 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 SPATA46Q5T0L3 261 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 C1orf185Q5T7R7 199 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 ATAD3BQ5T9A4 648 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 CASC4Q6P4E1 433 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 CLEC2AQ6UVW9 174 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 MACC1Q6ZN28 852 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 Q6ZSR9 355 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 PRSS42Q7Z5A4 293 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 PIGWQ7Z7B1 504 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 ZNF554Q86TJ5 538 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 MCEMP1Q8IX19 187 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 CFAP206Q8IYR0 622 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 AMER3Q8N944 861 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 TMEM178AQ8NBL3 297 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 OR13C2Q8NGS9 318 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 C9orf43Q8TAL5 461 aaPredicted RBP3.59□□□□□ -1.83
ITGB1-208ENST00000464001 SELENOMQ8WWX9 145 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 SNRNP40Q96DI7 357 aaKnown RBP3.59□□□□□ -1.83
ITGB1-208ENST00000464001 C16orf58Q96GQ5 468 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 EPSTI1Q96J88 318 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 LRRC3BQ96PB8 259 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 PANX3Q96QZ0 392 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 NAP1L3Q99457 506 aaPredicted RBP3.59□□□□□ -1.83
ITGB1-208ENST00000464001 OLFM1Q99784 485 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 CLSTN2Q9H4D0 955 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 RMND5AQ9H871 391 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 ECT2Q9H8V3 914 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 TMEM161AQ9NX61 479 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 RAI14Q9P0K7 980 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 TRIM10Q9UDY6 481 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 KCNN3Q9UGI6 736 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 CHRNA9Q9UGM1 479 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 N6AMT1Q9Y5N5 214 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 UBE4BO95155 1302 aa3.59□□□□□ -1.83
ITGB1-208ENST00000464001 AGRNO00468 2067 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 A0A087WZY1 265 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 C13orf42A0A1B0GVH6 325 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 NCF1BA6NI72 391 aaPredicted RBP3.58□□□□□ -1.84
ITGB1-208ENST00000464001 NCF1CA8MVU1 366 aaPredicted RBP3.58□□□□□ -1.84
ITGB1-208ENST00000464001 KIF2AO00139 706 aaPredicted RBP3.58□□□□□ -1.84
ITGB1-208ENST00000464001 ZNF197O14709 1029 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 CTDSPLO15194 276 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 CREG1O75629 220 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 GLCEO94923 617 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 KRT6BP04259 564 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 THRBP10828 461 aa3.58□□□□□ -1.84
ITGB1-208ENST00000464001 AKT2P31751 481 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms