RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TRIM74Q86UV6 250 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 SLC15A3Q8IY34 581 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 BBS5Q8N3I7 341 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 DNAAF3Q8N9W5 541 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 OR4K2Q8NGD2 314 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 C9orf43Q8TAL5 461 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 LKAAEAR1Q8TD35 194 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 LMX1AQ8TE12 382 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 STAMBPL1Q96FJ0 436 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 SCRN2Q96FV2 425 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 EBNA1BP2Q99848 306 aaKnown RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 MESP1Q9BRJ9 268 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 DPCDQ9BVM2 203 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 KIFC1Q9BW19 673 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 SPRY4Q9C004 299 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 SPRTNQ9H040 489 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 LRRN3Q9H3W5 708 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 ATP13A3Q9H7F0 1226 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 NRIP3Q9NQ35 241 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 ZNF71Q9NQZ8 489 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 MBNL1Q9NR56 388 aaKnown RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 EURLQ9NYK6 297 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 IL17CQ9P0M4 197 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 GALPQ9UBC7 116 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 SPASTQ9UBP0 616 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 PISDQ9UG56 409 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 APPL1Q9UKG1 709 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 PNMA8BQ9ULN7 279 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 AAR2Q9Y312 384 aaKnown RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 PPIL1Q9Y3C6 166 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 LOXL2Q9Y4K0 774 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 MAD1L1Q9Y6D9 718 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 PRSS21Q9Y6M0 314 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 CRYBG3Q68DQ2 2970 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 LRRK1Q38SD2 2015 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 C1orf232A0A0U1RR37 186 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 IGLON5A6NGN9 336 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 ERI2A8K979 691 aaKnown RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 NKX2-8O15522 239 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 OR1I1O60431 355 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 RECQL5O94762 991 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 VAPBO95292 243 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 GOT2P00505 430 aaKnown RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 EPOP01588 193 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 MLNP12872 115 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 TSHRP16473 764 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 ITIH1P19827 911 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 PSMA3P25788 255 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 SLC1A2P43004 574 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 TNNT3P45378 269 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 SLCO1A2P46721 670 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 NEK3P51956 506 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 PMS2P54278 862 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 EPHB1P54762 984 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 RPS21P63220 83 aaKnown RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 CDK16Q00536 496 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 B4GALNT1Q00973 533 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 TIAL1Q01085 375 aaKnown RBP eCLIP3.5□□□□□ -1.852e-6■■■□□ 18.2
SCFD1-204ENST00000463622 KLRB1Q12918 225 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 PIN1Q13526 163 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 CHRNA6Q15825 494 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 WSCD2Q2TBF2 565 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 TMEM52BQ4KMG9 183 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 HSP90AA5PQ58FG0 334 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 FAM219BQ5XKK7 198 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 C11orf87Q6NUJ2 197 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 CASC4Q6P4E1 433 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 FAM151BQ6UXP7 276 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 CENPUQ71F23 418 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 GLT6D1Q7Z4J2 308 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 PTAR1Q7Z6K3 402 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 SDR16C5Q8N3Y7 309 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 ARL10Q8N8L6 244 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 ZBTB34Q8NCN2 500 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 OR6C4Q8NGE1 309 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 RPL36ALQ969Q0 106 aaKnown RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 CENPTQ96BT3 561 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 CDKN2AIPNLQ96HQ2 116 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 SLC45A3Q96JT2 553 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 ZNF641Q96N77 438 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 MOGAT1Q96PD6 335 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 ZIM3Q96PE6 472 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 GFM1Q96RP9 751 aaKnown RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 RANBP9Q96S59 729 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 LYSMD1Q96S90 227 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 CMKLR1Q99788 373 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 RIOK2Q9BVS4 552 aaKnown RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 FUT8Q9BYC5 575 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 MS4A7Q9GZW8 240 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 TCEAL2Q9H3H9 227 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 XAB2Q9HCS7 855 aaKnown RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 IL26Q9NPH9 171 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 IARS2Q9NSE4 1012 aaKnown RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 NLE1Q9NVX2 485 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 LPAR3Q9UBY5 353 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 PHTF1Q9UMS5 762 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 RPS6KL1Q9Y6S9 549 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 SETD2Q9BYW2 2564 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 PLXNA2O75051 1894 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 ITPR3Q14573 2671 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms