RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	GPR83	Q9NYM4	423 aa		9.08	□□□□□ -0.96
PSMD4-208	ENST00000462970	PCDHGA11	Q9Y5H2	935 aa		9.08	□□□□□ -0.96
PSMD4-208	ENST00000462970	ZNF462	Q96JM2	2506 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	SMG1	Q96Q15	3661 aa	Known RBP	9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	IGLV3-12	A0A075B6K2	115 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	NSG1	A0A0A6YYJ2	146 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	IGHV3-20	A0A0C4DH32	117 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	LRIT2	A6NDA9	550 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	FAM227A	F5H4B4	570 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	PYCARD-AS1	I3L0S3	204 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970		K7EM74	188 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	RTCA	O00442	366 aa	Known RBP	9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	OR7A17	O14581	309 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	SPAG7	O75391	227 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	WFS1	O76024	890 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	SEC24D	O94855	1032 aa	Predicted RBP	9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	FH	P07954	510 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	NUDT17	P0C025	328 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	SBK3	P0C264	359 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	JAK1	P23458	1154 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	GSTM2	P28161	218 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	SERPINB1	P30740	379 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	SSR2	P43308	183 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	NEK2	P51955	445 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	RPS13	P62277	151 aa	Known RBP	9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	HERVK_113	P63132	956 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	C19orf57	Q0VDD7	668 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	IFT88	Q13099	833 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	ABRAXAS2	Q15018	415 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	NSDHL	Q15738	373 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	AP5B1	Q2VPB7	878 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	LIPJ	Q5W064	366 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	LANCL3	Q6ZV70	420 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	CHSY3	Q70JA7	882 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	SLC22A9	Q8IVM8	553 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	LAS2	Q8IYD9	372 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	CNPY4	Q8N129	248 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	CA13	Q8N1Q1	262 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	GALNT16	Q8N428	558 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	ZNF843	Q8N446	348 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	FAM47B	Q8NA70	645 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	OR2L5	Q8NG80	312 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	OR52B6	Q8NGF0	335 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	HUS1B	Q8NHY5	278 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	ZNF483	Q8TF39	744 aa	Predicted RBP	9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	ZNF473	Q8WTR7	871 aa	Known RBP	9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	TBC1D20	Q96BZ9	403 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	CMTM7	Q96FZ5	175 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	THOC3	Q96J01	351 aa	Known RBP	9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	SEC16B	Q96JE7	1060 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	PTCHD1	Q96NR3	888 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	CENPK	Q9BS16	269 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	SORBS1	Q9BX66	1292 aa	Known RBP	9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	ERVK-6	Q9BXR3	956 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	MS4A8	Q9BY19	250 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	TGIF2	Q9GZN2	237 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	TUBD1	Q9UJT1	453 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970	GRID1	Q9ULK0	1009 aa		9.07	□□□□□ -0.96
PSMD4-208	ENST00000462970		A8MUA0	341 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	PPP6C	O00743	305 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	PRMT3	O60678	531 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	ERLIN1	O75477	346 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	OR4F21	O95013	312 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	OTC	P00480	354 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	HP	P00738	406 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	PROC	P04070	461 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	TUBB	P07437	444 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	RPS17	P08708	135 aa	Known RBP	9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	MAOA	P21397	527 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	MTTP	P55157	894 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	OR4D2	P58180	307 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	CLC	Q05315	142 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	TRAF3	Q13114	568 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	AIMP2	Q13155	320 aa	Known RBP	9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	RUNX2	Q13950	521 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	TMEM35A	Q53FP2	167 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	UNC50	Q53HI1	259 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	SFT2D3	Q587I9	215 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	CFAP157	Q5JU67	520 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	KHDRBS2	Q5VWX1	349 aa	Known RBP	9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	FAM219B	Q5XKK7	198 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	METTL2B	Q6P1Q9	378 aa	Known RBP	9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	ABHD17C	Q6PCB6	329 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	ZYG11A	Q6WRX3	759 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	NDUFAF7	Q7L592	441 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	CPEB2	Q7Z5Q1	589 aa	Known RBP	9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	RIBC1	Q8N443	379 aa	Predicted RBP	9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	TMEM151A	Q8N4L1	468 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	SRFBP1	Q8NEF9	429 aa	Known RBP	9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	FDCSP	Q8NFU4	85 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	OR4F6	Q8NGB9	312 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	TSLP	Q969D9	159 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	RGMA	Q96B86	450 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	QRFPR	Q96P65	431 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	KCNC2	Q96PR1	638 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	TMEM237	Q96Q45	408 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	OR1F2P	Q96R84	312 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	SERINC2	Q96SA4	455 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	TBCD	Q9BTW9	1192 aa		9.06	□□□□□ -0.96
PSMD4-208	ENST00000462970	NUDT9	Q9BW91	350 aa		9.06	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms