RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 GAL3ST3Q96A11 431 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 KIAA1191Q96A73 305 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 SCMH1Q96GD3 660 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 MAGEB10Q96LZ2 347 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-207ENST00000461798 PTCHD1Q96NR3 888 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 UTP23Q9BRU9 249 aaKnown RBP8.59□□□□□ -1.03
BRCA1-207ENST00000461798 DPH5Q9H2P9 285 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 RHBGQ9H310 441 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 CNOT10Q9H9A5 744 aaKnown RBP8.59□□□□□ -1.03
BRCA1-207ENST00000461798 PRDM9Q9NQV7 894 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 TXNDC16Q9P2K2 825 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 PTBP2Q9UKA9 531 aaKnown RBP8.59□□□□□ -1.03
BRCA1-207ENST00000461798 PPIEQ9UNP9 301 aaKnown RBP8.59□□□□□ -1.03
BRCA1-207ENST00000461798 MMACHCQ9Y4U1 282 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 ASPDHA6ND91 283 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 C4orf51C9J302 202 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 FAM227AF5H4B4 570 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 PHGDHO43175 533 aaKnown RBP8.58□□□□□ -1.04
BRCA1-207ENST00000461798 MAN1A2O60476 641 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 PRAMEF4O60810 478 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 STK16O75716 305 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 WDR47O94967 919 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 CD46P15529 392 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 HPDP32754 393 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-207ENST00000461798 TRHRP34981 398 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-207ENST00000461798 SPRP35270 261 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-207ENST00000461798 HNF4AP41235 474 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 CASP2P42575 452 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 HSD17B7P56937 341 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 RAB10P61026 200 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 RUNX2Q13950 521 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 SLBPQ14493 270 aaKnown RBP eCLIP8.58□□□□□ -1.04
BRCA1-207ENST00000461798 TERF2Q15554 542 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 ZRSR2Q15696 482 aaKnown RBP8.58□□□□□ -1.04
BRCA1-207ENST00000461798 TBCCQ15814 346 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 KRTCAP3Q53RY4 240 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 TOR1AIP1Q5JTV8 583 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 LCE2CQ5TA81 110 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 PRAMEF9Q5VWM5 478 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 FCRLBQ6BAA4 426 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 ZDHHC24Q6UX98 284 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 GFRALQ6UXV0 394 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 VN1R5Q7Z5H4 357 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 SLC34A3Q8N130 599 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 KRT78Q8N1N4 520 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 SPATA6LQ8N4H0 392 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 PDPRQ8NCN5 879 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 THAP3Q8WTV1 239 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-207ENST00000461798 MS4A6EQ96DS6 147 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 QRFPRQ96P65 431 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 SIGLEC12Q96PQ1 595 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 TMEM79Q9BSE2 394 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 RBCK1Q9BYM8 510 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 CDCP1Q9H5V8 836 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 CAB39LQ9H9S4 337 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 NECTIN3Q9NQS3 549 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 DNAJC11Q9NVH1 559 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 SEC14L3Q9UDX4 400 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 ZNF490Q9ULM2 529 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-207ENST00000461798 UTP11Q9Y3A2 253 aaKnown RBP8.58□□□□□ -1.04
BRCA1-207ENST00000461798 CLDN16Q9Y5I7 305 aa8.58□□□□□ -1.04
BRCA1-207ENST00000461798 SVILO95425 2214 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 CCDC189A1A4V9 331 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 SYNDIG1LA6NDD5 238 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 SAGE2PA6NJ88 616 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 GABRR3A8MPY1 467 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 PSMD12O00232 456 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-207ENST00000461798 NEURL1O76050 574 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 UNC5CO95185 931 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 SP1P08047 785 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 EPORP19235 508 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 MAOAP21397 527 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 COL8A1P27658 744 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 CRABP2P29373 138 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 CASQ1P31415 396 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 HNRNPH1P31943 449 aaKnown RBP8.57□□□□□ -1.04
BRCA1-207ENST00000461798 DCTP40126 519 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 MAGEA4P43358 317 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 KCNC1P48547 511 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 GPR143P51810 404 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 PLTPP55058 493 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 KCNK10P57789 538 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 MLF1P58340 268 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 BTN3A2P78410 334 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 NAB1Q13506 487 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 LAPTM5Q13571 262 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 DOC2AQ14183 400 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 OR4D1Q15615 310 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 OR1C1Q15619 314 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 TRADDQ15628 312 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 SPINK14Q6IE38 97 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 SLC25A25Q6KCM7 469 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 ABHD17CQ6PCB6 329 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 CAPN12Q6ZSI9 719 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 ISCA2Q86U28 154 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 SCUBE1Q8IWY4 988 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.57□□□□□ -1.04
BRCA1-207ENST00000461798 HORMAD2Q8N7B1 307 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 TMEM178AQ8NBL3 297 aa8.57□□□□□ -1.04
BRCA1-207ENST00000461798 ARMC2Q8NEN0 867 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms