RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 GCNT6Q5T4J0 391 aa19.31■□□□□ 0.68
CCM2-203ENST00000461377 ANGPTL8Q6UXH0 198 aa19.31■□□□□ 0.68
CCM2-203ENST00000461377 PRDM8Q9NQV8 689 aa19.31■□□□□ 0.68
CCM2-203ENST00000461377 TMEFF2Q9UIK5 374 aaPredicted RBP19.31■□□□□ 0.68
CCM2-203ENST00000461377 ACSL6Q9UKU0 697 aa19.31■□□□□ 0.68
CCM2-203ENST00000461377 NCKAP1Q9Y2A7 1128 aa19.31■□□□□ 0.68
CCM2-203ENST00000461377 hCG_2039718K7EN88 272 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 HS6ST1O60243 411 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 LCMT2O60294 686 aaKnown RBP19.3■□□□□ 0.68
CCM2-203ENST00000461377 DRD1P21728 446 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 RBBP4Q09028 425 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 KRT33BQ14525 404 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 RPE65Q16518 533 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 TMEM26Q6ZUK4 368 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 FAM124AQ86V42 546 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 ARL10Q8N8L6 244 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 OR2M4Q96R27 311 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 RAD21L1Q9H4I0 556 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 TRPV5Q9NQA5 729 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 ADPRHL2Q9NX46 363 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 C3orf18Q9UK00 162 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 CEPT1Q9Y6K0 416 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 PRSS38A1L453 326 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 TMEM229AB2RXF0 380 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 PRICKLE3O43900 615 aaPredicted RBP19.3■□□□□ 0.68
CCM2-203ENST00000461377 CLEC3AO75596 197 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 FKBP9O95302 570 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 ETS2P15036 469 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 MRPS21P82921 87 aaKnown RBP19.3■□□□□ 0.68
CCM2-203ENST00000461377 KCNAB2Q13303 367 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 RFX4Q33E94 735 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 IQCCQ4KMZ1 466 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 ZC3H12BQ5HYM0 836 aaKnown RBP19.3■□□□□ 0.68
CCM2-203ENST00000461377 UBE3DQ7Z6J8 389 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 NUDT13Q86X67 352 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 DCP2Q8IU60 420 aaKnown RBP19.3■□□□□ 0.68
CCM2-203ENST00000461377 GALNT15Q8N3T1 639 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 SMRP1Q8NCR6 262 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 ZNF555Q8NEP9 628 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 RGMAQ96B86 450 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 TMEM38AQ9H6F2 299 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 EPS8L2Q9H6S3 715 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 C1GALT1Q9NS00 363 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 ADAM29Q9UKF5 820 aa19.3■□□□□ 0.68
CCM2-203ENST00000461377 NUP214P35658 2090 aaPredicted RBP19.29■□□□□ 0.68
CCM2-203ENST00000461377 TRBC2A0A5B9 178 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 POM121BA6NF01 834 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 ENO4A6NNW6 628 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 SUV39H1O43463 412 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 DPM1O60762 260 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 PIGAP37287 484 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 GSTM5P46439 218 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 ITGA1P56199 1179 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 KCNJ10P78508 379 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 GRSF1Q12849 480 aaKnown RBP eCLIP19.29■□□□□ 0.68
CCM2-203ENST00000461377 SLC5A12Q1EHB4 618 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 TRIM40Q6P9F5 258 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 CEP68Q76N32 757 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 ADCK2Q7Z695 626 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 THAP5Q7Z6K1 395 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 PLD3Q8IV08 490 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 C8orf59Q8N0T1 100 aaPredicted RBP19.29■□□□□ 0.68
CCM2-203ENST00000461377 NATD1Q8N6N6 113 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 DENND6BQ8NEG7 585 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 CREB3L4Q8TEY5 395 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 C7orf34Q96L11 122 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 MRGPRX1Q96LB2 322 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 PAPOLBQ9NRJ5 636 aaKnown RBP19.29■□□□□ 0.68
CCM2-203ENST00000461377 SCHIP1Q9P0W5 487 aaPredicted RBP19.29■□□□□ 0.68
CCM2-203ENST00000461377 BAG5Q9UL15 447 aa19.29■□□□□ 0.68
CCM2-203ENST00000461377 PRAMEF33A0A0G2JMD5 474 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 SCAMP1O15126 338 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 KRT75O95678 551 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 FPR1P21462 350 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 UQCRC2P22695 453 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 AQP1P29972 269 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 DNAJA1P31689 397 aaKnown RBP19.28■□□□□ 0.68
CCM2-203ENST00000461377 CHI3L1P36222 383 aaPredicted RBP19.28■□□□□ 0.68
CCM2-203ENST00000461377 CASP9P55211 416 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 CLDN2P57739 230 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 EEF1A2Q05639 463 aaKnown RBP19.28■□□□□ 0.68
CCM2-203ENST00000461377 HEPACAMQ14CZ8 416 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 RNF130Q86XS8 419 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 TTLQ8NG68 377 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 OR5AK3PQ8NH89 298 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 TMIGD2Q96BF3 282 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 ZNF764Q96H86 408 aaPredicted RBP19.28■□□□□ 0.68
CCM2-203ENST00000461377 TPD52L3Q96J77 140 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 BARD1Q99728 777 aaKnown RBP19.28■□□□□ 0.68
CCM2-203ENST00000461377 DOHHQ9BU89 302 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 C8orf33Q9H7E9 229 aaPredicted RBP19.28■□□□□ 0.68
CCM2-203ENST00000461377 CXorf36Q9H7Y0 433 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 ATG2BQ96BY7 2078 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 TMPRSS11DO60235 418 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 SOAT1P35610 550 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 RAD23AP54725 363 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 SCARB2Q14108 478 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 ELOAQ14241 798 aaKnown RBP19.28■□□□□ 0.68
CCM2-203ENST00000461377 CCDC80Q76M96 950 aa19.28■□□□□ 0.68
CCM2-203ENST00000461377 OR1E3Q8WZA6 343 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms