RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 PRDX1Q06830 199 aaKnown RBP13.49□□□□□ -0.25
ERCC3-205ENST00000460485 COL9A2Q14055 689 aaPredicted RBP13.49□□□□□ -0.25
ERCC3-205ENST00000460485 ZNF630Q2M218 657 aaPredicted RBP13.49□□□□□ -0.25
ERCC3-205ENST00000460485 ZCCHC8Q6NZY4 707 aaKnown RBP13.49□□□□□ -0.25
ERCC3-205ENST00000460485 USP51Q70EK9 711 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 CBLL1Q75N03 491 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 PHACTR4Q8IZ21 702 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 SRFBP1Q8NEF9 429 aaKnown RBP13.49□□□□□ -0.25
ERCC3-205ENST00000460485 ZNF555Q8NEP9 628 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 GPR156Q8NFN8 814 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 TSPAN14Q8NG11 270 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 OR52N2Q8NGI0 321 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 NETO1Q8TDF5 533 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 GFM2Q969S9 779 aaKnown RBP13.49□□□□□ -0.25
ERCC3-205ENST00000460485 C12orf66Q96MD2 445 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 CAMK1GQ96NX5 476 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 FERD3LQ96RJ6 166 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 TSC22D3Q99576 134 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 LGR4Q9BXB1 951 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 FOXQ1Q9C009 403 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 CHST8Q9H2A9 424 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 IL1RAPQ9NPH3 570 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 SLC6A13Q9NSD5 602 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 TMEM184CQ9NVA4 438 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 DDX18Q9NVP1 670 aaKnown RBP13.49□□□□□ -0.25
ERCC3-205ENST00000460485 DNAAF2Q9NVR5 837 aaKnown RBP13.49□□□□□ -0.25
ERCC3-205ENST00000460485 TAS2R9Q9NYW1 312 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 EHD3Q9NZN3 535 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 SH3BP4Q9P0V3 963 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 SERGEFQ9UGK8 458 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 USP22Q9UPT9 525 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 DMTF1Q9Y222 760 aa13.49□□□□□ -0.25
ERCC3-205ENST00000460485 DOCK9Q9BZ29 2069 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 A0A1W2PQF6 199 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 TRIM64CA6NLI5 447 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 UPK1AO00322 258 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 LRP3O75074 770 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 BMP10O95393 424 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 KLF8O95600 359 aaPredicted RBP13.48□□□□□ -0.25
ERCC3-205ENST00000460485 PAK4O96013 591 aaPredicted RBP13.48□□□□□ -0.25
ERCC3-205ENST00000460485 FABP3P05413 133 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 GSNP06396 782 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 ACP5P13686 325 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 DRD2P14416 443 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 DDCP20711 480 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 KDELR2P33947 212 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 SHMT2P34897 504 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 SEC13P55735 322 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 ADARB1P78563 741 aaKnown RBP13.48□□□□□ -0.25
ERCC3-205ENST00000460485 CSTF1Q05048 431 aaKnown RBP13.48□□□□□ -0.25
ERCC3-205ENST00000460485 TGM3Q08188 693 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 C2orf80Q0P641 193 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 KRT33BQ14525 404 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 NFATC4Q14934 902 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 MLC1Q15049 377 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 RGNQ15493 299 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 CYBRD1Q53TN4 286 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 CCNYL2Q5T2Q4 361 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 SHQ1Q6PI26 577 aaKnown RBP13.48□□□□□ -0.25
ERCC3-205ENST00000460485 TTC33Q6PID6 262 aaPredicted RBP13.48□□□□□ -0.25
ERCC3-205ENST00000460485 ENPP6Q6UWR7 440 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 CHST15Q7LFX5 561 aaPredicted RBP13.48□□□□□ -0.25
ERCC3-205ENST00000460485 ZC3H7AQ8IWR0 971 aaKnown RBP13.48□□□□□ -0.25
ERCC3-205ENST00000460485 CLEC4FQ8N1N0 589 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 FAM47BQ8NA70 645 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 SPDYE1Q8NFV5 336 aaPredicted RBP13.48□□□□□ -0.25
ERCC3-205ENST00000460485 FAM174AQ8TBP5 190 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 MAGEE2Q8TD90 523 aaPredicted RBP13.48□□□□□ -0.25
ERCC3-205ENST00000460485 ZFPM2Q8WW38 1151 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 LZICQ8WZA0 190 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 EZH1Q92800 747 aaPredicted RBP13.48□□□□□ -0.25
ERCC3-205ENST00000460485 SLC22A18Q96BI1 424 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 WDR92Q96MX6 357 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 MKRN2Q9H000 416 aaKnown RBP13.48□□□□□ -0.25
ERCC3-205ENST00000460485 OSGEPL1Q9H4B0 414 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 NTN4Q9HB63 628 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 GMEB2Q9UKD1 530 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 PCOLCE2Q9UKZ9 415 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 BLOC1S6Q9UL45 172 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 SH2B3Q9UQQ2 575 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 OR1A2Q9Y585 309 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 PIAS3Q9Y6X2 628 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 COMMD3-BMI1R4GMX3 469 aa13.48□□□□□ -0.25
ERCC3-205ENST00000460485 NUP214P35658 2090 aaPredicted RBP13.48□□□□□ -0.25
ERCC3-205ENST00000460485 CNOT1A5YKK6 2376 aaKnown RBP13.47□□□□□ -0.25
ERCC3-205ENST00000460485 TBC1D3DA0A087WVF3 549 aa13.47□□□□□ -0.25
ERCC3-205ENST00000460485 TBC1D3IA0A087WXS9 549 aa13.47□□□□□ -0.25
ERCC3-205ENST00000460485 TBC1D3EA0A087X179 549 aa13.47□□□□□ -0.25
ERCC3-205ENST00000460485 TBC1D3KA0A087X1G2 549 aa13.47□□□□□ -0.25
ERCC3-205ENST00000460485 A0A1W2PPV9 198 aa13.47□□□□□ -0.25
ERCC3-205ENST00000460485 PRSS38A1L453 326 aa13.47□□□□□ -0.25
ERCC3-205ENST00000460485 TBC1D3FA6NER0 549 aaPredicted RBP13.47□□□□□ -0.25
ERCC3-205ENST00000460485 TBC1D3LB9A6J9 549 aa13.47□□□□□ -0.25
ERCC3-205ENST00000460485 DLGAP1O14490 977 aa13.47□□□□□ -0.25
ERCC3-205ENST00000460485 NDUFS4O43181 175 aa13.47□□□□□ -0.25
ERCC3-205ENST00000460485 AHCYL1O43865 530 aa13.47□□□□□ -0.25
ERCC3-205ENST00000460485 E2F6O75461 281 aa13.47□□□□□ -0.25
ERCC3-205ENST00000460485 TGFB1P01137 390 aa13.47□□□□□ -0.25
ERCC3-205ENST00000460485 SEMG1P04279 462 aa13.47□□□□□ -0.25
ERCC3-205ENST00000460485 TBC1D3HP0C7X1 549 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms