RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 PEX1O43933 1283 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 DNAJC8O75937 253 aaPredicted RBP1.96□□□□□ -2.1
NEDD1-204ENST00000457368 RNF8O76064 485 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 RALBP11234 206 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 PSMA2P25787 234 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 XIAPP98170 497 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 USP10Q14694 798 aaKnown RBP1.96□□□□□ -2.1
NEDD1-204ENST00000457368 PDCD2Q16342 344 aaPredicted RBP1.96□□□□□ -2.1
NEDD1-204ENST00000457368 GPR33Q49SQ1 333 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 PRR31Q5SQ13 230 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 WASHC2DQ5SRD0 308 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 FNBP1LQ5T0N5 605 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 UBAP2Q5T6F2 1119 aaKnown RBP1.96□□□□□ -2.1
NEDD1-204ENST00000457368 NCBP2-AS2Q69YL0 99 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 NLRC3Q7RTR2 1065 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 ANKRD37Q7Z713 158 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 CFAP206Q8IYR0 622 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 OR5M3Q8NGP4 307 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 SLC30A5Q8TAD4 765 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 ZNF398Q8TD17 642 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 TMEM125Q96AQ2 219 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 SARAFQ96BY9 339 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 MAP6Q96JE9 813 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 CYTH2Q99418 400 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 VN1R1Q9GZP7 353 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 ESRP2Q9H6T0 727 aaKnown RBP1.96□□□□□ -2.1
NEDD1-204ENST00000457368 KCNK13Q9HB14 408 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 KLHL1Q9NR64 748 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 PNPLA3Q9NST1 481 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 PARVAQ9NVD7 372 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 TRHDEQ9UKU6 1024 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 IKBKGQ9Y6K9 419 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 SONP18583 2426 aaKnown RBP1.96□□□□□ -2.1
NEDD1-204ENST00000457368 A0A096LNT2 108 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 TMEM82A0PJX8 343 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 FAM170AA1A519 330 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 CD8B2A6NJW9 211 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 OR2AG2A6NM03 316 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 A8MV72 311 aaPredicted RBP1.96□□□□□ -2.1
NEDD1-204ENST00000457368 DEFB108AA8MXU0 73 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 GOLGA6L6A8MZA4 724 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 AHRRA9YTQ3 701 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 H7C0S8 307 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 ACOT7O00154 380 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 AURKAO14965 403 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 MFSD11O43934 449 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 CTSVO60911 334 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 EPPINO95925 133 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 F10P00742 488 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 UGT1A6P19224 532 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 MAGP20916 626 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 MCM3P25205 808 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 IL1R2P27930 398 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 UQCRC1P31930 480 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 KCNC1P48547 511 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 MECP2P51608 486 aaKnown RBP1.96□□□□□ -2.1
NEDD1-204ENST00000457368 SLC26A5P58743 744 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 CHRNEQ04844 493 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 TBX2Q13207 712 aaPredicted RBP1.96□□□□□ -2.1
NEDD1-204ENST00000457368 FASTKQ14296 549 aaKnown RBP1.96□□□□□ -2.1
NEDD1-204ENST00000457368 GRB7Q14451 532 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 SF3B4Q15427 424 aaKnown RBP eCLIP1.96□□□□□ -2.12e-9■■■□□ 16.5
NEDD1-204ENST00000457368 TERF2Q15554 542 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 BTBD16Q32M84 506 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 MZT2AQ6P582 158 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 DCUN1D2Q6PH85 259 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 SHISA6Q6ZSJ9 500 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 STRA8Q7Z7C7 330 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 NT5DC3Q86UY8 548 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 MYLK4Q86YV6 388 aaPredicted RBP1.96□□□□□ -2.1
NEDD1-204ENST00000457368 LACC1Q8IV20 430 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 ULK2Q8IYT8 1036 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 FAM109AQ8N4B1 249 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 LILRA3Q8N6C8 439 aaPredicted RBP1.96□□□□□ -2.1
NEDD1-204ENST00000457368 LINC01555Q8NAE3 123 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 GDAP1Q8TB36 358 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 PUM2Q8TB72 1066 aaKnown RBP eCLIP1.96□□□□□ -2.12e-8■■■■■ 29.4
NEDD1-204ENST00000457368 METTL21AQ8WXB1 218 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 ZFP3Q96NJ6 502 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 CLUHP3Q96NS8 147 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 SMC6Q96SB8 1091 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 ZNF670Q9BS34 389 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 HGH1Q9BTY7 390 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 TRIM7Q9C029 511 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 NDST4Q9H3R1 872 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 XKR8Q9H6D3 395 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 UGT1A10Q9HAW8 530 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 CLK4Q9HAZ1 481 aaKnown RBP1.96□□□□□ -2.1
NEDD1-204ENST00000457368 IL1RL2Q9HB29 575 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 ACKR4Q9NPB9 350 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.96□□□□□ -2.1
NEDD1-204ENST00000457368 SHOC2Q9UQ13 582 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 MXRA5Q9NR99 2828 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 PRRC2CQ9Y520 2896 aaKnown RBP1.96□□□□□ -2.1
NEDD1-204ENST00000457368 TLN2Q9Y4G6 2542 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
NEDD1-204ENST00000457368 MBD3L3A6NE82 208 aaPredicted RBP1.96□□□□□ -2.1
NEDD1-204ENST00000457368 ARHGEF33A8MVX0 844 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 MAGEB17A8MXT2 336 aa1.96□□□□□ -2.1
NEDD1-204ENST00000457368 B2RBV5 119 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms