RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 HAS1Q92839 578 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 KAT5Q92993 513 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 ADIPOR1Q96A54 375 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 SLC41A3Q96GZ6 507 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 C9orf72Q96LT7 481 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 LRFN5Q96NI6 719 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 PANX1Q96RD7 426 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 ELF4Q99607 663 aaPredicted RBP5.19□□□□□ -1.58
VPS41-209ENST00000457055 ASCL2Q99929 193 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 ALKBH7Q9BT30 221 aaPredicted RBP5.19□□□□□ -1.58
VPS41-209ENST00000457055 BCL2L14Q9BZR8 327 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 TOLLIPQ9H0E2 274 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 UPF3AQ9H1J1 476 aaKnown RBP5.19□□□□□ -1.58
VPS41-209ENST00000457055 PIGUQ9H490 435 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 MLXIPLQ9NP71 852 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 MMP25Q9NPA2 562 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 CCNB1IP1Q9NPC3 277 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 ZC4H2Q9NQZ6 224 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 ACSS2Q9NR19 701 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 ABCB10Q9NRK6 738 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 SLC6A13Q9NSD5 602 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 SAMSN1Q9NSI8 373 aaKnown RBP5.19□□□□□ -1.58
VPS41-209ENST00000457055 ZFP57Q9NU63 452 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 FAIMQ9NVQ4 179 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 MS4A12Q9NXJ0 267 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 ERAP1Q9NZ08 941 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 SPG21Q9NZD8 308 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 PTTG2Q9NZH5 202 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 GCNT4Q9P109 453 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 TXNDC16Q9P2K2 825 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 BCAP29Q9UHQ4 241 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 DNAI1Q9UI46 699 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 MID2Q9UJV3 735 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 NUP50Q9UKX7 468 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 HPSEQ9Y251 543 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 GMPPBQ9Y5P6 360 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 KLF2Q9Y5W3 355 aaPredicted RBP5.19□□□□□ -1.58
VPS41-209ENST00000457055 CFAP20Q9Y6A4 193 aaKnown RBP5.19□□□□□ -1.58
VPS41-209ENST00000457055 XDHP47989 1333 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 SZT2Q5T011 3432 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 C4BP0C0L5 1744 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 CUL9Q8IWT3 2517 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 NCAPD2Q15021 1401 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 A0A0A6YYC8 382 aaPredicted RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 FAM240BA0A1B0GVZ2 78 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 A0A1W2PRB8 838 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 OR2A25A4D2G3 310 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 ASB14A6NK59 587 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 SMIM23A6NLE4 172 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 OR2AG2A6NM03 316 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 KDM4EB2RXH2 506 aaPredicted RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 I3L1I5 382 aaPredicted RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 PEX12O00623 359 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 ZNF213O14771 459 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 KIAA0391O15091 583 aaKnown RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 ZNF208O43345 1280 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 RNF13O43567 381 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 STX11O75558 287 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 SEC14L2O76054 403 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 PRPF6O94906 941 aaKnown RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 F10P00742 488 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 MT-ND2P03891 347 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 JUNP05412 331 aaKnown RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 LYNP07948 512 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 CHRM2P08172 466 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 PLEKP08567 350 aaPredicted RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 FAM58BPP0C7Q3 252 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 C8orf89P0DMQ9 161 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 CCNB1P14635 433 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 BMP5P22003 454 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 UGT1A1P22309 533 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 EEF1B2P24534 225 aaKnown RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 RBL1P28749 1068 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 CHRNA5P30532 468 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 OXTRP30559 389 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 DCTDP32321 178 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 IGHMBP2P38935 993 aaKnown RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 PBX3P40426 434 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 NPY2RP49146 381 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 GMPSP49915 693 aaPredicted RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 CCNG1P51959 295 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 NDST2P52849 883 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 EMP2P54851 167 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 ACTBP60709 375 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 AP1S1P61966 158 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 ACTA2P62736 377 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 GNAI1P63096 354 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 ACTG1P63261 375 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 ACTG2P63267 376 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 ACTC1P68032 377 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 ACTA1P68133 377 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 MRPS9P82933 396 aaKnown RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 ECT2LQ008S8 904 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 COL10A1Q03692 680 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 RAD51Q06609 339 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 TMEM115Q12893 351 aaPredicted RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 BMT2Q1RMZ1 405 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 KLHL22Q53GT1 634 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 RABL3Q5HYI8 236 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 COQ5Q5HYK3 327 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms