RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 NR3C1P04150 777 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 UQCRHP07919 91 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 PDHA1P08559 390 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 HKR1P10072 659 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 OSMP13725 252 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 CXCR2P25025 360 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 MCM3P25205 808 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 SPINT3P49223 89 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 CYB561P49447 251 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 GZMKP49863 264 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 HLCSP50747 726 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 PPIAP62937 165 aaKnown RBP4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 DEUP1Q05D60 604 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 MGAT2Q10469 447 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 FOXL1Q12952 345 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 PRKAA1Q13131 559 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 TAZQ16635 292 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 NFIL3Q16649 462 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 PARP15Q460N3 678 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 TRNP1Q6NT89 227 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 RWDD4Q6NW29 188 aaKnown RBP4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 SPESP1Q6UW49 350 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 PLXDC2Q6UX71 529 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 FAM183BPQ6ZVS7 135 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 MDGA2Q7Z553 956 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 TRIM73Q86UV7 250 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 CMTM4Q8IZR5 234 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 METTL27Q8N6F8 245 aaPredicted RBP4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 BANPQ8N9N5 519 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 ANKRD53Q8N9V6 530 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 PIK3C3Q8NEB9 887 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 LILRB1Q8NHL6 650 aaPredicted RBP4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 RASSF8Q8NHQ8 419 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 DENND1AQ8TEH3 1009 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 HSPBAP1Q96EW2 488 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 CFAP57Q96MR6 1250 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 DOCK7Q96N67 2140 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 PSKH2Q96QS6 385 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 OR2A14Q96R47 310 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 RBM24Q9BX46 236 aaKnown RBP4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 RSPO3Q9BXY4 272 aaPredicted RBP4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 MMP27Q9H306 513 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 FAM83DQ9H4H8 585 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 NOD2Q9HC29 1040 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 MMP25Q9NPA2 562 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 CUTCQ9NTM9 273 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 TMEM51Q9NW97 253 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 KLHL28Q9NXS3 571 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 ALKBH4Q9NXW9 302 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 PDP1Q9P0J1 537 aaPredicted RBP4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 SPRR3Q9UBC9 169 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 OAZ3Q9UMX2 235 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 CNTN6Q9UQ52 1028 aa4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 KLF13Q9Y2Y9 288 aaPredicted RBP4.8□□□□□ -1.64
SBDSP1-204ENST00000453858 PLXNB1O43157 2135 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 IGHV3-20A0A0C4DH32 117 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 LCE6AA0A183 80 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 FEZF1A0PJY2 475 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 RGSL1A5PLK6 1076 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 A8MXE2 369 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 EEF1E1-BLOC1S5C9J1V9 151 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 TRIM77I1YAP6 450 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 EEF1E1O43324 174 aaKnown RBP4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 AKR1B10O60218 316 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 PRAMEF4O60810 478 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 ITGA10O75578 1167 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 SLC25A14O95258 325 aaPredicted RBP4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 CLDN7O95471 211 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 CD8AP01732 235 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 CDKN1AP38936 164 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 GABRB2P47870 512 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 ITGA8P53708 1063 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 LOXL3P58215 753 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 OCA2Q04671 838 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 DUSP2Q05923 314 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 CCDC14Q49A88 953 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 ACSF3Q4G176 576 aaPredicted RBP4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 CCDC38Q502W7 563 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 WDR59Q6PJI9 974 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 ZNF704Q6ZNC4 412 aaPredicted RBP4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 RGS9BPQ6ZS82 235 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 INTS8Q75QN2 995 aaKnown RBP4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 RHOUQ7L0Q8 258 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 FAM131BQ86XD5 332 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 PGBD5Q8N414 524 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 RTL3Q8N8U3 475 aaKnown RBP4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 ZNF441Q8N8Z8 693 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 OR14K1Q8NGZ2 314 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 M1APQ8TC57 530 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 ZNF480Q8WV37 535 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 CFHR4Q92496 578 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 N4BP2L2Q92802 583 aaPredicted RBP4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 KAT5Q92993 513 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 RAB11FIP5Q9BXF6 653 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 PANK2Q9BZ23 570 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 SRMSQ9H3Y6 488 aa4.79□□□□□ -1.64
SBDSP1-204ENST00000453858 TFB2MQ9H5Q4 396 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms