RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 SAGE2PA6NJ88 616 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 SDR42E2A6NKP2 422 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 E7ESA3 106 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 FCHO1O14526 889 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 SLC16A5O15375 505 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 PEX1O43933 1283 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 PRMT3O60678 531 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 HAUS5O94927 633 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 TPOP07202 933 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 F7P08709 466 aaPredicted RBP10.9□□□□□ -0.66
HERC3-207ENST00000452979 HOXD4P09016 255 aaPredicted RBP10.9□□□□□ -0.66
HERC3-207ENST00000452979 CDH1P12830 882 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 MSX1P28360 303 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 CHRNB4P30926 498 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 SLC1A2P43004 574 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 MEOX1P50221 254 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 VSNL1P62760 191 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 SKP1P63208 163 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 BTG2P78543 158 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 TIAL1Q01085 375 aaKnown RBP eCLIP10.9□□□□□ -0.66
HERC3-207ENST00000452979 DHX9Q08211 1270 aaKnown RBP10.9□□□□□ -0.66
HERC3-207ENST00000452979 NAE1Q13564 534 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 FASTKD3Q14CZ7 662 aaKnown RBP10.9□□□□□ -0.66
HERC3-207ENST00000452979 CASC4Q6P4E1 433 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 CEP128Q6ZU80 1094 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 IGDCC3Q8IVU1 814 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 ZFP62Q8NB50 900 aaPredicted RBP10.9□□□□□ -0.66
HERC3-207ENST00000452979 NT5CQ8TCD5 201 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 EEF1AKMT1Q8WVE0 214 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 IFT81Q8WYA0 676 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 ZNF669Q96BR6 464 aaPredicted RBP10.9□□□□□ -0.66
HERC3-207ENST00000452979 PTCHD1Q96NR3 888 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 HAUS8Q9BT25 410 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 AARSD1Q9BTE6 412 aaKnown RBP10.9□□□□□ -0.66
HERC3-207ENST00000452979 TMUB1Q9BVT8 246 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 ATG10Q9H0Y0 220 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 TP63Q9H3D4 680 aaPredicted RBP10.9□□□□□ -0.66
HERC3-207ENST00000452979 PLAC1Q9HBJ0 212 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 KCNJ16Q9NPI9 418 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 KCNN3Q9UGI6 736 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 NFU1Q9UMS0 254 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 RNF6Q9Y252 685 aa10.9□□□□□ -0.66
HERC3-207ENST00000452979 TRBC2A0A5B9 178 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 TFECO14948 347 aaPredicted RBP10.89□□□□□ -0.67
HERC3-207ENST00000452979 NDUFS4O43181 175 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 OR1F1O43749 312 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 HS6ST1O60243 411 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 B4GALT2O60909 372 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 SMIM10L1P0DMW3 83 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 CCR8P51685 355 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 ART1P52961 327 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 OLR1P78380 273 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 CAV1Q03135 178 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 CBLBQ13191 982 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 SP140Q13342 867 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 DEFB134Q4QY38 66 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 EMC4Q5J8M3 183 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 HP1BP3Q5SSJ5 553 aaPredicted RBP10.89□□□□□ -0.67
HERC3-207ENST00000452979 UBAP2Q5T6F2 1119 aaKnown RBP10.89□□□□□ -0.67
HERC3-207ENST00000452979 UGT3A1Q6NUS8 523 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 ARHGAP11AQ6P4F7 1023 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 CD163Q86VB7 1156 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 IFT20Q8IY31 132 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 APCDD1LQ8NCL9 501 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 OR56A3Q8NH54 315 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 UTP15Q8TED0 518 aaKnown RBP10.89□□□□□ -0.67
HERC3-207ENST00000452979 RND1Q92730 232 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 SMIM10Q96HG1 83 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 SIGLEC10Q96LC7 697 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 DEFB126Q9BYW3 111 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 UCK2Q9BZX2 261 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 PRDM9Q9NQV7 894 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 SAMD15Q9P1V8 674 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 ZFP69BQ9UJL9 534 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 PPIEQ9UNP9 301 aaKnown RBP10.89□□□□□ -0.67
HERC3-207ENST00000452979 TEX264Q9Y6I9 313 aa10.89□□□□□ -0.67
HERC3-207ENST00000452979 NKX2-6A6NCS4 301 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 B3GALT4O96024 378 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 HIST1H2AGP0C0S8 130 aaPredicted RBP10.88□□□□□ -0.67
HERC3-207ENST00000452979 FAM153BP0C7A2 387 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 HIST1H2ADP20671 130 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 DNAJA1P31689 397 aaKnown RBP10.88□□□□□ -0.67
HERC3-207ENST00000452979 AHRP35869 848 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 RFC3P40938 356 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 ARL4CP56559 192 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 PDIA2Q13087 525 aaKnown RBP10.88□□□□□ -0.67
HERC3-207ENST00000452979 TERF2Q15554 542 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 BBS9Q3SYG4 887 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 FAM153CQ494X1 144 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 CES4AQ5XG92 561 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 MBOAT1Q6ZNC8 495 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 ACAD11Q709F0 780 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 ABHD13Q7L211 337 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 MDGA2Q7Z553 956 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 PALM2Q8IXS6 379 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 CYP4X1Q8N118 509 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 PDIK1LQ8N165 341 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 B3GNT7Q8NFL0 401 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 OR52N2Q8NGI0 321 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 CALML6Q8TD86 181 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms