RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 RAB33BQ9H082 229 aa4.55□□□□□ -1.68
HMGB1P26-201ENST00000452520 ZMYND12Q9H0C1 365 aa4.55□□□□□ -1.68
HMGB1P26-201ENST00000452520 RIMS4Q9H426 269 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P26-201ENST00000452520 BICC1Q9H694 974 aaKnown RBP4.55□□□□□ -1.68
HMGB1P26-201ENST00000452520 ZDHHC6Q9H6R6 413 aa4.55□□□□□ -1.68
HMGB1P26-201ENST00000452520 DCLRE1BQ9H816 532 aa4.55□□□□□ -1.68
HMGB1P26-201ENST00000452520 ROPN1Q9HAT0 212 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P26-201ENST00000452520 SDF2L1Q9HCN8 221 aa4.55□□□□□ -1.68
HMGB1P26-201ENST00000452520 A4GALTQ9NPC4 353 aa4.55□□□□□ -1.68
HMGB1P26-201ENST00000452520 ECHDC1Q9NTX5 307 aa4.55□□□□□ -1.68
HMGB1P26-201ENST00000452520 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB1P26-201ENST00000452520 SPHK1Q9NYA1 384 aa4.55□□□□□ -1.68
HMGB1P26-201ENST00000452520 IL20RAQ9UHF4 553 aa4.55□□□□□ -1.68
HMGB1P26-201ENST00000452520 TNNQ9UQP3 1299 aa4.55□□□□□ -1.68
HMGB1P26-201ENST00000452520 TMED7Q9Y3B3 224 aa4.55□□□□□ -1.68
HMGB1P26-201ENST00000452520 KDRP35968 1356 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 TRAV18A0A075B6X5 111 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 E5RGE8 158 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 UBXN8O00124 270 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 E2F3O00716 465 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 CHADO15335 359 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 ADAM12O43184 909 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 LRP3O75074 770 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 PRSS1P07477 247 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 LIFP15018 202 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 HNRNPA2B1P22626 353 aaKnown RBP4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 TIMP3P35625 211 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 SULT1E1P49888 294 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 KLC1Q07866 573 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 MSLNQ13421 630 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 ZC2HC1CQ53FD0 456 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 SULT1C3Q6IMI6 304 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 CD164L2Q6UWJ8 174 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 TMEM26Q6ZUK4 368 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 TRMT1LQ7Z2T5 733 aaKnown RBP4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 ADGRD2Q7Z7M1 963 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 DCUN1D3Q8IWE4 304 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 CDK20Q8IZL9 346 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 MAPKAPK5-AS1Q8N8E1 139 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 SIDT2Q8NBJ9 832 aaKnown RBP4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 MINDY2Q8NBR6 621 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 OR52B4Q8NGK2 314 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 MAP3K3Q99759 626 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 COQ7Q99807 217 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 SSX3Q99909 188 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 DPEP3Q9H4B8 488 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 TLE6Q9H808 572 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 ACTR8Q9H981 624 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 ATAD3AQ9NVI7 634 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 CNOT2Q9NZN8 540 aaKnown RBP4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 PSORS1C1Q9UIG5 152 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 NSG2Q9Y328 171 aa4.54□□□□□ -1.68
HMGB1P26-201ENST00000452520 IGLV9-49A0A0B4J1Y8 123 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 TMEM89A2RUT3 159 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 ZSCAN5CA6NGD5 496 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 H3BMM5 538 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 CHUKO15111 745 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 PRKRAO75569 313 aaKnown RBP4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 SPAG6O75602 509 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 KRT8P05787 483 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 FRMD6-AS1P0C7T7 363 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 ZCCHC18P0CG32 403 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 THRBP10828 461 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 B4GALT1P15291 398 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 PSMA5P28066 241 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 SRD5A2P31213 254 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 DUTP33316 252 aaKnown RBP4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 B3GALT5-AS1P59052 145 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 RPP38P78345 283 aaKnown RBP4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 GABPB1Q06547 395 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 CARTPTQ16568 116 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 ITPRIPL2Q3MIP1 535 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 BOLA3Q53S33 107 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 SLC35E4Q6ICL7 350 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 CENPPQ6IPU0 288 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 UGT3A1Q6NUS8 523 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 CTR9Q6PD62 1173 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 TRPT1Q86TN4 253 aaKnown RBP4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 STPG4Q8N801 248 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 OR2T34Q8NGX1 318 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 TM9SF4Q92544 642 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 LGALS12Q96DT0 336 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 RBM41Q96IZ5 413 aaKnown RBP4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 UHRF2Q96PU4 802 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 PIGQQ9BRB3 760 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 ALKBH7Q9BT30 221 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 PANK2Q9BZ23 570 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 LAT2Q9GZY6 243 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 MIS12Q9H081 205 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 SDCBP2Q9H190 292 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 TRPV6Q9H1D0 765 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 C5orf66Q9H5L9 145 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 SDR39U1Q9NRG7 319 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 RABL2AQ9UBK7 228 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 COPS7AQ9UBW8 275 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 NARFQ9UHQ1 456 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 ZDHHC2Q9UIJ5 367 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 ENTPD4Q9Y227 616 aa4.53□□□□□ -1.68
HMGB1P26-201ENST00000452520 CCDC162PA2VCL2 907 aa4.52□□□□□ -1.69
HMGB1P26-201ENST00000452520 TRIM49BA6NDI0 452 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms