RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 RHBDF1Q96CC6 855 aa25.37■■□□□ 1.65
USP42-204ENST00000451154 DEFB126Q9BYW3 111 aa25.37■■□□□ 1.65
USP42-204ENST00000451154 RUBCNLQ9H714 662 aa25.37■■□□□ 1.65
USP42-204ENST00000451154 GRPEL1Q9HAV7 217 aa25.37■■□□□ 1.65
USP42-204ENST00000451154 GPAMQ9HCL2 828 aa25.37■■□□□ 1.65
USP42-204ENST00000451154 SMYD2Q9NRG4 433 aa25.37■■□□□ 1.65
USP42-204ENST00000451154 SAR1BQ9Y6B6 198 aa25.37■■□□□ 1.65
USP42-204ENST00000451154 NCOA6Q14686 2063 aaPredicted RBP25.36■■□□□ 1.65
USP42-204ENST00000451154 NCF1BA6NI72 391 aaPredicted RBP25.36■■□□□ 1.65
USP42-204ENST00000451154 NCF1CA8MVU1 366 aaPredicted RBP25.36■■□□□ 1.65
USP42-204ENST00000451154 E7ESA3 106 aa25.36■■□□□ 1.65
USP42-204ENST00000451154 SNRPB2P08579 225 aaKnown RBP25.36■■□□□ 1.65
USP42-204ENST00000451154 NCF1P14598 390 aaPredicted RBP25.36■■□□□ 1.65
USP42-204ENST00000451154 GNAZP19086 355 aa25.36■■□□□ 1.65
USP42-204ENST00000451154 RPL21P46778 160 aaKnown RBP25.36■■□□□ 1.65
USP42-204ENST00000451154 ZNF630Q2M218 657 aaPredicted RBP25.36■■□□□ 1.65
USP42-204ENST00000451154 XKRXQ6PP77 449 aa25.36■■□□□ 1.65
USP42-204ENST00000451154 Q6ZPB1 254 aaPredicted RBP25.36■■□□□ 1.65
USP42-204ENST00000451154 SPATA6LQ8N4H0 392 aa25.36■■□□□ 1.65
USP42-204ENST00000451154 CPSF7Q8N684 471 aaKnown RBP25.36■■□□□ 1.65
USP42-204ENST00000451154 VPS39Q96JC1 886 aa25.36■■□□□ 1.65
USP42-204ENST00000451154 FAR2Q96K12 515 aa25.36■■□□□ 1.65
USP42-204ENST00000451154 RHOJQ9H4E5 214 aa25.36■■□□□ 1.65
USP42-204ENST00000451154 MTO1Q9Y2Z2 717 aaKnown RBP25.36■■□□□ 1.65
USP42-204ENST00000451154 CDK2AP1O14519 115 aa25.35■■□□□ 1.65
USP42-204ENST00000451154 NME2P1O60361 137 aa25.35■■□□□ 1.65
USP42-204ENST00000451154 NME2P22392 152 aa25.35■■□□□ 1.65
USP42-204ENST00000451154 HNRNPH1P31943 449 aaKnown RBP25.35■■□□□ 1.65
USP42-204ENST00000451154 SLC6A12P48065 614 aa25.35■■□□□ 1.65
USP42-204ENST00000451154 HLCSP50747 726 aa25.35■■□□□ 1.65
USP42-204ENST00000451154 STXBP1P61764 594 aaKnown RBP25.35■■□□□ 1.65
USP42-204ENST00000451154 MRPS25P82663 173 aaKnown RBP25.35■■□□□ 1.65
USP42-204ENST00000451154 HSF1Q00613 529 aa25.35■■□□□ 1.65
USP42-204ENST00000451154 TMIGD1Q6UXZ0 262 aa25.35■■□□□ 1.65
USP42-204ENST00000451154 ADAMTSL2Q86TH1 951 aa25.35■■□□□ 1.65
USP42-204ENST00000451154 ZBED8Q8IZ13 594 aa25.35■■□□□ 1.65
USP42-204ENST00000451154 CCT6BQ92526 530 aa25.35■■□□□ 1.65
USP42-204ENST00000451154 MCMBPQ9BTE3 642 aa25.35■■□□□ 1.65
USP42-204ENST00000451154 TRIM45Q9H8W5 580 aaPredicted RBP25.35■■□□□ 1.65
USP42-204ENST00000451154 CHST11Q9NPF2 352 aa25.35■■□□□ 1.65
USP42-204ENST00000451154 PNO1Q9NRX1 252 aaKnown RBP25.35■■□□□ 1.65
USP42-204ENST00000451154 MYO1DO94832 1006 aa25.34■■□□□ 1.65
USP42-204ENST00000451154 TRHRP34981 398 aaPredicted RBP25.34■■□□□ 1.65
USP42-204ENST00000451154 SLBPQ14493 270 aaKnown RBP eCLIP25.34■■□□□ 1.65
USP42-204ENST00000451154 KLHDC8AQ8IYD2 350 aa25.34■■□□□ 1.65
USP42-204ENST00000451154 GAL3ST3Q96A11 431 aa25.34■■□□□ 1.65
USP42-204ENST00000451154 MS4A6EQ96DS6 147 aa25.34■■□□□ 1.65
USP42-204ENST00000451154 PDLIM2Q96JY6 352 aa25.34■■□□□ 1.65
USP42-204ENST00000451154 KRT12Q99456 494 aa25.34■■□□□ 1.65
USP42-204ENST00000451154 NAPGQ99747 312 aaPredicted RBP25.34■■□□□ 1.65
USP42-204ENST00000451154 CAB39LQ9H9S4 337 aa25.34■■□□□ 1.65
USP42-204ENST00000451154 NSMCE4AQ9NXX6 385 aa25.34■■□□□ 1.65
USP42-204ENST00000451154 MEMO1Q9Y316 297 aa25.34■■□□□ 1.65
USP42-204ENST00000451154 MMACHCQ9Y4U1 282 aa25.34■■□□□ 1.65
USP42-204ENST00000451154 PDZD2O15018 2839 aa25.34■■□□□ 1.65
USP42-204ENST00000451154 TRBV11-1A0A0K0K1C0 115 aa25.33■■□□□ 1.65
USP42-204ENST00000451154 LRIT2A6NDA9 550 aa25.33■■□□□ 1.65
USP42-204ENST00000451154 CCDC188H7C350 402 aa25.33■■□□□ 1.65
USP42-204ENST00000451154 FCHO1O14526 889 aa25.33■■□□□ 1.65
USP42-204ENST00000451154 ERI3O43414 337 aaKnown RBP25.33■■□□□ 1.65
USP42-204ENST00000451154 PAFAH1B1P43034 410 aa25.33■■□□□ 1.65
USP42-204ENST00000451154 SMSP52788 366 aa25.33■■□□□ 1.65
USP42-204ENST00000451154 SLC12A2P55011 1212 aa25.33■■□□□ 1.65
USP42-204ENST00000451154 TGFBIQ15582 683 aa25.33■■□□□ 1.65
USP42-204ENST00000451154 FBXO48Q5FWF7 155 aa25.33■■□□□ 1.65
USP42-204ENST00000451154 NCCRP1Q6ZVX7 275 aaPredicted RBP25.33■■□□□ 1.65
USP42-204ENST00000451154 GHDCQ8N2G8 530 aa25.33■■□□□ 1.65
USP42-204ENST00000451154 APCDD1LQ8NCL9 501 aa25.33■■□□□ 1.65
USP42-204ENST00000451154 TMEM125Q96AQ2 219 aa25.33■■□□□ 1.65
USP42-204ENST00000451154 DERL2Q9GZP9 239 aa25.33■■□□□ 1.65
USP42-204ENST00000451154 POPDC3Q9HBV1 291 aa25.33■■□□□ 1.65
USP42-204ENST00000451154 CACNA1CQ13936 2221 aa25.33■■□□□ 1.65
USP42-204ENST00000451154 CXorf49A8MYA2 514 aaPredicted RBP25.32■■□□□ 1.64
USP42-204ENST00000451154 TAPBPO15533 448 aa25.32■■□□□ 1.64
USP42-204ENST00000451154 ABOP16442 354 aa25.32■■□□□ 1.64
USP42-204ENST00000451154 ZNF24P17028 368 aa25.32■■□□□ 1.64
USP42-204ENST00000451154 PPP2R1BP30154 601 aa25.32■■□□□ 1.64
USP42-204ENST00000451154 CLCN2P51788 898 aa25.32■■□□□ 1.64
USP42-204ENST00000451154 HNRNPFP52597 415 aaKnown RBP25.32■■□□□ 1.64
USP42-204ENST00000451154 POU4F1Q01851 419 aa25.32■■□□□ 1.64
USP42-204ENST00000451154 CDSNQ15517 529 aa25.32■■□□□ 1.64
USP42-204ENST00000451154 CHERPQ8IWX8 916 aaKnown RBP25.32■■□□□ 1.64
USP42-204ENST00000451154 SCUBE1Q8IWY4 988 aa25.32■■□□□ 1.64
USP42-204ENST00000451154 KRT78Q8N1N4 520 aa25.32■■□□□ 1.64
USP42-204ENST00000451154 TMEM52Q8NDY8 209 aa25.32■■□□□ 1.64
USP42-204ENST00000451154 B3GNT7Q8NFL0 401 aa25.32■■□□□ 1.64
USP42-204ENST00000451154 TTLQ8NG68 377 aa25.32■■□□□ 1.64
USP42-204ENST00000451154 ESAMQ96AP7 390 aa25.32■■□□□ 1.64
USP42-204ENST00000451154 NPLQ9BXD5 320 aaPredicted RBP25.32■■□□□ 1.64
USP42-204ENST00000451154 PRTFDC1Q9NRG1 225 aa25.32■■□□□ 1.64
USP42-204ENST00000451154 FBXW2Q9UKT8 454 aa25.32■■□□□ 1.64
USP42-204ENST00000451154 ADGRG4Q8IZF6 3080 aa25.32■■□□□ 1.64
USP42-204ENST00000451154 OTOGQ6ZRI0 2925 aa25.31■■□□□ 1.64
USP42-204ENST00000451154 TGFBR3LH3BV60 316 aa25.31■■□□□ 1.64
USP42-204ENST00000451154 PRAMEF4O60810 478 aa25.31■■□□□ 1.64
USP42-204ENST00000451154 WISP3O95389 354 aaPredicted RBP25.31■■□□□ 1.64
USP42-204ENST00000451154 SSTR1P30872 391 aa25.31■■□□□ 1.64
USP42-204ENST00000451154 PLA2G16P53816 162 aa25.31■■□□□ 1.64
USP42-204ENST00000451154 PRAMEF9Q5VWM5 478 aa25.31■■□□□ 1.64
USP42-204ENST00000451154 ARMC10Q8N2F6 343 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms