RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 B4GALT2O60909 372 aa18.2■□□□□ 0.5
USP40-207ENST00000450940 URI1O94763 535 aaPredicted RBP18.2■□□□□ 0.5
USP40-207ENST00000450940 UQCRHP07919 91 aa18.2■□□□□ 0.5
USP40-207ENST00000450940 MYBL2P10244 700 aa18.2■□□□□ 0.5
USP40-207ENST00000450940 TFEBP19484 476 aa18.2■□□□□ 0.5
USP40-207ENST00000450940 CD22P20273 847 aa18.2■□□□□ 0.5
USP40-207ENST00000450940 EFTUD2Q15029 972 aaKnown RBP eCLIP18.2■□□□□ 0.5
USP40-207ENST00000450940 PDK4Q16654 411 aa18.2■□□□□ 0.5
USP40-207ENST00000450940 FBXO48Q5FWF7 155 aa18.2■□□□□ 0.5
USP40-207ENST00000450940 LGI4Q8N135 537 aa18.2■□□□□ 0.5
USP40-207ENST00000450940 MMGT1Q8N4V1 131 aa18.2■□□□□ 0.5
USP40-207ENST00000450940 ELP5Q8TE02 316 aa18.2■□□□□ 0.5
USP40-207ENST00000450940 C16orf45Q96MC5 204 aaPredicted RBP18.2■□□□□ 0.5
USP40-207ENST00000450940 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.2■□□□□ 0.5
USP40-207ENST00000450940 ALG9Q9H6U8 611 aa18.2■□□□□ 0.5
USP40-207ENST00000450940 NUDT4Q9NZJ9 180 aa18.2■□□□□ 0.5
USP40-207ENST00000450940 SLC5A6Q9Y289 635 aa18.2■□□□□ 0.5
USP40-207ENST00000450940 ACOT9Q9Y305 439 aa18.2■□□□□ 0.5
USP40-207ENST00000450940 CCDC189A1A4V9 331 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 ANKDD1BA6NHY2 528 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 FAM227AF5H4B4 570 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 KERAO60938 352 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 F10P00742 488 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 LDLRP01130 860 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 LTA4HP09960 611 aaKnown RBP18.19■□□□□ 0.5
USP40-207ENST00000450940 HPDP32754 393 aaPredicted RBP18.19■□□□□ 0.5
USP40-207ENST00000450940 BTN3A2P78410 334 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 LAPTM5Q13571 262 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 RUNX2Q13950 521 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 SLMAPQ14BN4 828 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 MEP1AQ16819 746 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 RAPH1Q70E73 1250 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 LRRC70Q7Z2Q7 622 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 TBC1D1Q86TI0 1168 aaPredicted RBP18.19■□□□□ 0.5
USP40-207ENST00000450940 CRLF3Q8IUI8 442 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 BEST3Q8N1M1 668 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 SNX31Q8N9S9 440 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 NFAM1Q8NET5 270 aaPredicted RBP18.19■□□□□ 0.5
USP40-207ENST00000450940 OR2L5Q8NG80 312 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 UBTD2Q8WUN7 234 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 FAR2Q96K12 515 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 FUT8Q9BYC5 575 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 NECTIN3Q9NQS3 549 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 OLAHQ9NV23 265 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 MMACHCQ9Y4U1 282 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 ASB1Q9Y576 335 aa18.19■□□□□ 0.5
USP40-207ENST00000450940 PSMD12O00232 456 aaPredicted RBP18.18■□□□□ 0.5
USP40-207ENST00000450940 ERI3O43414 337 aaKnown RBP18.18■□□□□ 0.5
USP40-207ENST00000450940 S100BP04271 92 aaPredicted RBP18.18■□□□□ 0.5
USP40-207ENST00000450940 MTHFD2P13995 350 aa18.18■□□□□ 0.5
USP40-207ENST00000450940 MAOAP21397 527 aa18.18■□□□□ 0.5
USP40-207ENST00000450940 TDGF1P3P51864 188 aa18.18■□□□□ 0.5
USP40-207ENST00000450940 XKR6Q5GH73 641 aa18.18■□□□□ 0.5
USP40-207ENST00000450940 FCRLBQ6BAA4 426 aa18.18■□□□□ 0.5
USP40-207ENST00000450940 ABHD17CQ6PCB6 329 aa18.18■□□□□ 0.5
USP40-207ENST00000450940 SCUBE1Q8IWY4 988 aa18.18■□□□□ 0.5
USP40-207ENST00000450940 CENPLQ8N0S6 344 aaPredicted RBP18.18■□□□□ 0.5
USP40-207ENST00000450940 DNAJB8Q8NHS0 232 aa18.18■□□□□ 0.5
USP40-207ENST00000450940 RHEBL1Q8TAI7 183 aa18.18■□□□□ 0.5
USP40-207ENST00000450940 SUN3Q8TAQ9 357 aa18.18■□□□□ 0.5
USP40-207ENST00000450940 NR4A3Q92570 626 aa18.18■□□□□ 0.5
USP40-207ENST00000450940 NXNL1Q96CM4 212 aa18.18■□□□□ 0.5
USP40-207ENST00000450940 ACSS3Q9H6R3 686 aa18.18■□□□□ 0.5
USP40-207ENST00000450940 ABI3Q9P2A4 366 aa18.18■□□□□ 0.5
USP40-207ENST00000450940 PLEKHB1Q9UF11 243 aaPredicted RBP18.18■□□□□ 0.5
USP40-207ENST00000450940 CLDN16Q9Y5I7 305 aa18.18■□□□□ 0.5
USP40-207ENST00000450940 A0A087X1B8 175 aa18.17■□□□□ 0.5
USP40-207ENST00000450940 A0A088AWK7 358 aa18.17■□□□□ 0.5
USP40-207ENST00000450940 SAGE2PA6NJ88 616 aa18.17■□□□□ 0.5
USP40-207ENST00000450940 CCNT2O60583 730 aaKnown RBP18.17■□□□□ 0.5
USP40-207ENST00000450940 C2P06681 752 aa18.17■□□□□ 0.5
USP40-207ENST00000450940 ZNF10P21506 573 aaPredicted RBP18.17■□□□□ 0.5
USP40-207ENST00000450940 HSD17B7P56937 341 aa18.17■□□□□ 0.5
USP40-207ENST00000450940 CHIT1Q13231 466 aa18.17■□□□□ 0.5
USP40-207ENST00000450940 TUBA3CQ13748 450 aa18.17■□□□□ 0.5
USP40-207ENST00000450940 PAGE2BQ5JRK9 111 aa18.17■□□□□ 0.5
USP40-207ENST00000450940 ADNP2Q6IQ32 1131 aa18.17■□□□□ 0.5
USP40-207ENST00000450940 TUBA3EQ6PEY2 450 aa18.17■□□□□ 0.5
USP40-207ENST00000450940 CEP128Q6ZU80 1094 aa18.17■□□□□ 0.5
USP40-207ENST00000450940 ARMC10Q8N2F6 343 aa18.17■□□□□ 0.5
USP40-207ENST00000450940 SLC5A8Q8N695 610 aa18.17■□□□□ 0.5
USP40-207ENST00000450940 MDS2Q8NDY4 140 aa18.17■□□□□ 0.5
USP40-207ENST00000450940 CCT6BQ92526 530 aa18.17■□□□□ 0.5
USP40-207ENST00000450940 REXO4Q9GZR2 422 aaKnown RBP18.17■□□□□ 0.5
USP40-207ENST00000450940 TSPYL1Q9H0U9 437 aa18.17■□□□□ 0.5
USP40-207ENST00000450940 PRDM7Q9NQW5 492 aa18.17■□□□□ 0.5
USP40-207ENST00000450940 NINJ2Q9NZG7 142 aa18.17■□□□□ 0.5
USP40-207ENST00000450940 DMGDHQ9UI17 866 aaKnown RBP18.17■□□□□ 0.5
USP40-207ENST00000450940 K7EPI3 171 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 UBXN8O00124 270 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 MAN1A2O60476 641 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 RASAL1O95294 804 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 CRYABP02511 175 aaKnown RBP18.16■□□□□ 0.5
USP40-207ENST00000450940 PHBP35232 272 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 CD96P40200 585 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 RAB38P57729 211 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 TAS2R50P59544 299 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 IRF8Q02556 426 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 TERF2Q15554 542 aa18.16■□□□□ 0.5
USP40-207ENST00000450940 HIST2H2ACQ16777 129 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms