RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 PIF1Q9H611 641 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 PILRAQ9UKJ1 303 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 NVLO15381 856 aaKnown RBP13.57□□□□□ -0.24
USP39-207ENST00000450066 LAMTOR5O43504 91 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 CTSVO60911 334 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 PIAS2O75928 621 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 CPSF4O95639 269 aaKnown RBP13.57□□□□□ -0.24
USP39-207ENST00000450066 ANXA6P08133 673 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 DDX5P17844 614 aaKnown RBP13.57□□□□□ -0.24
USP39-207ENST00000450066 MUM1Q2TAK8 710 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 LYSMD4Q5XG99 296 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 ARMC6Q6NXE6 501 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 TRIM40Q6P9F5 258 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 KLHL35Q6PF15 583 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 OGFOD3Q6PK18 319 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 ZNF793Q6ZN11 406 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 ZNF621Q6ZSS3 439 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 ASPGQ86U10 573 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 SPPL2CQ8IUH8 684 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 GOT1L1Q8NHS2 421 aaPredicted RBP13.57□□□□□ -0.24
USP39-207ENST00000450066 TM4SF19Q96DZ7 209 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 ZNF764Q96H86 408 aaPredicted RBP13.57□□□□□ -0.24
USP39-207ENST00000450066 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.57□□□□□ -0.24
USP39-207ENST00000450066 PRDM7Q9NQW5 492 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 EVA1BQ9NVM1 165 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 C6orf203Q9P0P8 240 aaPredicted RBP13.57□□□□□ -0.24
USP39-207ENST00000450066 MAGEL2Q9UJ55 1249 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 POMT2Q9UKY4 750 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 USP22Q9UPT9 525 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 GMEB1Q9Y692 573 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 EVPLLA8MZ36 301 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 GPR37L1O60883 481 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 UBXN7O94888 489 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 EPN2O95208 641 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 STATHP02808 62 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 SLC35G6P0C7Q6 338 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 HIST1H1TP22492 207 aaPredicted RBP13.57□□□□□ -0.24
USP39-207ENST00000450066 SLC7A1P30825 629 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 VHLP40337 213 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 LSSP48449 732 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 RGS1Q08116 209 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 TGM3Q08188 693 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 MPEG1Q2M385 716 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 DEFB133Q30KQ1 61 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 CALHM3Q86XJ0 350 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 TICAM1Q8IUC6 712 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 ZCCHC7Q8N3Z6 543 aaKnown RBP13.57□□□□□ -0.24
USP39-207ENST00000450066 NATD1Q8N6N6 113 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 RSC1A1Q92681 617 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 NECAB3Q96P71 396 aaPredicted RBP13.57□□□□□ -0.24
USP39-207ENST00000450066 FCRL4Q96PJ5 515 aa13.57□□□□□ -0.24
USP39-207ENST00000450066 A0A1B0GTW7 788 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 A0A1B0GVT2 93 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 LILRA5A6NI73 299 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 C4orf51C9J302 202 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 CLIC1O00299 241 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 SDC3O75056 442 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 FAM58BPP0C7Q3 252 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 TYRP1P17643 537 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 ATP5A1P25705 553 aaKnown RBP13.56□□□□□ -0.24
USP39-207ENST00000450066 GZMMP51124 257 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 SLC9A5Q14940 896 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 IRAK1BP1Q5VVH5 260 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 PMS2CLQ68D20 193 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 ZNF438Q7Z4V0 828 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 MMP21Q8N119 569 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 PQLC1Q8N2U9 271 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 AMER3Q8N944 861 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 ACOT4Q8N9L9 421 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 FAM47BQ8NA70 645 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 GAB3Q8WWW8 586 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 ZFYVE21Q9BQ24 234 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 UCKL1Q9NWZ5 548 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 VPS4AQ9UN37 437 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 PCDHGB4Q9UN71 923 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 AP4S1Q9Y587 144 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 THADAQ6YHU6 1953 aa13.56□□□□□ -0.24
USP39-207ENST00000450066 MDC1Q14676 2089 aaKnown RBP13.56□□□□□ -0.24
USP39-207ENST00000450066 A0A0G2JN53 185 aa13.55□□□□□ -0.24
USP39-207ENST00000450066 C1orf226A1L170 272 aa13.55□□□□□ -0.24
USP39-207ENST00000450066 DRD2P14416 443 aa13.55□□□□□ -0.24
USP39-207ENST00000450066 GNSP15586 552 aa13.55□□□□□ -0.24
USP39-207ENST00000450066 NCK1P16333 377 aa13.55□□□□□ -0.24
USP39-207ENST00000450066 ENGP17813 658 aa13.55□□□□□ -0.24
USP39-207ENST00000450066 GPX2P18283 190 aa13.55□□□□□ -0.24
USP39-207ENST00000450066 GGT1P19440 569 aa13.55□□□□□ -0.24
USP39-207ENST00000450066 EFNA1P20827 205 aaPredicted RBP13.55□□□□□ -0.24
USP39-207ENST00000450066 CTSKP43235 329 aa13.55□□□□□ -0.24
USP39-207ENST00000450066 DHPSP49366 369 aaPredicted RBP13.55□□□□□ -0.24
USP39-207ENST00000450066 ABHD18Q0P651 414 aa13.55□□□□□ -0.24
USP39-207ENST00000450066 BIRC2Q13490 618 aa13.55□□□□□ -0.24
USP39-207ENST00000450066 PRSS53Q2L4Q9 553 aa13.55□□□□□ -0.24
USP39-207ENST00000450066 GLYATQ6IB77 296 aa13.55□□□□□ -0.24
USP39-207ENST00000450066 RNF44Q7L0R7 432 aa13.55□□□□□ -0.24
USP39-207ENST00000450066 SERPINA11Q86U17 422 aa13.55□□□□□ -0.24
USP39-207ENST00000450066 C1orf210Q8IVY1 113 aa13.55□□□□□ -0.24
USP39-207ENST00000450066 MAML2Q8IZL2 1156 aaPredicted RBP13.55□□□□□ -0.24
USP39-207ENST00000450066 DTWD1Q8N5C7 304 aa13.55□□□□□ -0.24
USP39-207ENST00000450066 OR4A15Q8NGL6 344 aa13.55□□□□□ -0.24
USP39-207ENST00000450066 OR8K5Q8NH50 307 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms