RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 GRK1Q15835 563 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 CGB2Q6NT52 195 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 POMZP3Q6PJE2 187 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 VITQ6UXI7 678 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 CDHR3Q6ZTQ4 885 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 C7orf61Q8IZ16 206 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 FAM109AQ8N4B1 249 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 SLC35F5Q8WV83 523 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 CDKN2AIPNLQ96HQ2 116 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 PCDHGA7Q9Y5G6 932 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 LAMA4Q16363 1823 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 OR2AG2A6NM03 316 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 TGM6O95932 706 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 KCNE1P15382 129 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 ZNF14P17017 642 aaPredicted RBP13.45□□□□□ -0.26
ITGB4-202ENST00000449880 TCEA1P23193 301 aaKnown RBP13.45□□□□□ -0.26
ITGB4-202ENST00000449880 ETV4P43268 484 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 LEPRP48357 1165 aaKnown RBP13.45□□□□□ -0.26
ITGB4-202ENST00000449880 E2F1Q01094 437 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 INCA1Q0VD86 236 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 SIRPB2Q5JXA9 342 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 UBXN11Q5T124 520 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 ANKRD54Q6NXT1 300 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 LRRC69Q6ZNQ3 347 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 SLC44A3Q8N4M1 653 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 KREMEN2Q8NCW0 462 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 PSMG2Q969U7 264 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 FUBP3Q96I24 572 aaKnown RBP eCLIP13.45□□□□□ -0.26
ITGB4-202ENST00000449880 TCEAL7Q9BRU2 100 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 RAB11FIP5Q9BXF6 653 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 TMLHEQ9NVH6 421 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 TMEM5Q9Y2B1 443 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 CHD4Q14839 1912 aa13.45□□□□□ -0.26
ITGB4-202ENST00000449880 CHRNA4P43681 627 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 PGDP52209 483 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 STC1P52823 247 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 SPANXN4Q5MJ08 99 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 AGAP7PQ5VUJ5 663 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 AGAP6Q5VW22 663 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 SLC22A10Q63ZE4 541 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 OR7G1Q8NGA0 311 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 RTP4Q96DX8 246 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 CHFRQ96EP1 664 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 AGAP4Q96P64 663 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 DHRS4Q9BTZ2 278 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 DOHHQ9BU89 302 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 DPCDQ9BVM2 203 aaPredicted RBP13.44□□□□□ -0.26
ITGB4-202ENST00000449880 FAM170BA6NMN3 283 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 CCL22O00626 93 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 OR1F1O43749 312 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 TLX2O43763 284 aaPredicted RBP13.44□□□□□ -0.26
ITGB4-202ENST00000449880 EIF2DP41214 584 aaKnown RBP13.44□□□□□ -0.26
ITGB4-202ENST00000449880 NFE2L1Q14494 772 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 C6orf136Q5SQH8 315 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 NUDT13Q86X67 352 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 ARL14EPQ8N8R7 260 aaPredicted RBP13.44□□□□□ -0.26
ITGB4-202ENST00000449880 ATP6V1C2Q8NEY4 427 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 OR2L3Q8NG85 312 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 OR7D4Q8NG98 312 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 NFKBIDQ8NI38 313 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 PRR11Q96HE9 360 aaPredicted RBP13.44□□□□□ -0.26
ITGB4-202ENST00000449880 ITM2CQ9NQX7 267 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 TRAV6A0A075B6T7 132 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 F2P00734 622 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 C8AP07357 584 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 CHRM5P08912 532 aaPredicted RBP13.44□□□□□ -0.26
ITGB4-202ENST00000449880 GNSP15586 552 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 PVALBP20472 110 aaPredicted RBP13.44□□□□□ -0.26
ITGB4-202ENST00000449880 MAP3K8P41279 467 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 RPS5P46782 204 aaKnown RBP13.44□□□□□ -0.26
ITGB4-202ENST00000449880 OR3A3P47888 321 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 OR3A2P47893 321 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 AVPR1BP47901 424 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 SYPL2Q5VXT5 272 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 GDF6Q6KF10 455 aaPredicted RBP13.44□□□□□ -0.26
ITGB4-202ENST00000449880 Q6ZNX1 250 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 ZFAND4Q86XD8 727 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 OR8J1Q8NGP2 316 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 NEIL3Q8TAT5 605 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 MAFIPQ8WZ33 124 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 ZNF514Q96K75 400 aaPredicted RBP13.44□□□□□ -0.26
ITGB4-202ENST00000449880 CDK15Q96Q40 435 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 NOP16Q9Y3C1 178 aaKnown RBP13.44□□□□□ -0.26
ITGB4-202ENST00000449880 AP1M2Q9Y6Q5 423 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 CXCR4P61073 352 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 HMGCS1Q01581 520 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 LINC00299Q6ZSB3 139 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 CHDHQ8NE62 594 aaPredicted RBP13.44□□□□□ -0.26
ITGB4-202ENST00000449880 OR5J2Q8NH18 312 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 ZBED3Q96IU2 234 aaPredicted RBP13.44□□□□□ -0.26
ITGB4-202ENST00000449880 PIP5K1AQ99755 562 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 TP63Q9H3D4 680 aaPredicted RBP13.44□□□□□ -0.26
ITGB4-202ENST00000449880 QPCTLQ9NXS2 382 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 ZDHHC3Q9NYG2 299 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 CACNA1SQ13698 1873 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 HAS3O00219 553 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 PCDHGA12O60330 932 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 SLC13A2Q13183 592 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 PROX2Q3B8N5 592 aa13.44□□□□□ -0.26
ITGB4-202ENST00000449880 L3HYPDHQ96EM0 354 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms