RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 TMED2Q15363 201 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 RPS6KA1Q15418 735 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 MEI1Q5TIA1 1274 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 ICE2Q659A1 982 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 ITPRIPL1Q6GPH6 555 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 DENND5AQ6IQ26 1287 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 TMEM214Q6NUQ4 689 aaKnown RBP11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 FAM47EQ6ZV65 393 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 ROBO4Q8WZ75 1007 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 TBC1D20Q96BZ9 403 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 FOPNLQ96NB1 174 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 NAPGQ99747 312 aaPredicted RBP11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 MACROD1Q9BQ69 325 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 GORASP1Q9BQQ3 440 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 ARNT2Q9HBZ2 717 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 TAC3Q9UHF0 121 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 CDC42EP3Q9UKI2 254 aa11.63□□□□□ -0.55
AC004540.1-204ENST00000449537 ANK2Q01484 3957 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 CTAGE9A4FU28 777 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 OR51F1A6NGY5 319 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 HAT1O14929 419 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 B4GALT2O60909 372 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 FTCDO95954 541 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 IL18BPO95998 194 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 KRT1P04264 644 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 PECAM1P16284 738 aaPredicted RBP11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 JAK1P23458 1154 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 ADARP55265 1226 aaKnown RBP11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 GNG11P61952 73 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 FOXO1Q12778 655 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 VEZF1Q14119 521 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 TFDP2Q14188 446 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 SF3B4Q15427 424 aaKnown RBP eCLIP11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 ZNF750Q32MQ0 723 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 ACSF3Q4G176 576 aaPredicted RBP11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 SEL1L2Q5TEA6 688 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 PLEKHM3Q6ZWE6 761 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 PDSS2Q86YH6 399 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 RCOR2Q8IZ40 523 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 APCDD1LQ8NCL9 501 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 LKAAEAR1Q8TD35 194 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 P3H4Q92791 437 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 HSPBAP1Q96EW2 488 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 EBNA1BP2Q99848 306 aaKnown RBP11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 TBL1YQ9BQ87 522 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 ZNF701Q9NV72 531 aaPredicted RBP11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 NAALAD2Q9Y3Q0 740 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 HYOU1Q9Y4L1 999 aa11.62□□□□□ -0.55
AC004540.1-204ENST00000449537 KDM4EB2RXH2 506 aaPredicted RBP11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 CTIFO43310 598 aaKnown RBP11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 CST8O60676 142 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 OR2J2O76002 312 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 ZFAND5O76080 213 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 OR6B1O95007 311 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 FOXN2P32314 431 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 THBS2P35442 1172 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 ABATP80404 500 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 HYAL2Q12891 473 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 SPARCL1Q14515 664 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 CLEC12BQ2HXU8 276 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 XKR6Q5GH73 641 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 VN1R4Q7Z5H5 301 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 SLC26A11Q86WA9 606 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 KRT222Q8N1A0 295 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 SLC35F6Q8N357 371 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 B3GNT7Q8NFL0 401 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 OR9A1PQ8NGU1 263 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 ZCCHC10Q8TBK6 192 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 TMEM171Q8WVE6 324 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 MAIP1Q8WWC4 291 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 ZBED6CLQ96FA7 236 aaPredicted RBP11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 PIK3IP1Q96FE7 263 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 CCDC138Q96M89 665 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 NAP1L3Q99457 506 aaPredicted RBP11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 CCDC77Q9BR77 488 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 BEX2Q9BXY8 128 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 GALNT8Q9NY28 637 aa11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 TUBA8Q9NY65 449 aaPredicted RBP11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 RUVBL2Q9Y230 463 aaKnown RBP11.61□□□□□ -0.55
AC004540.1-204ENST00000449537 HEATR5AQ86XA9 2040 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 KCNE1BA0A087WTH5 132 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 CCDC162PA2VCL2 907 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 ZNF860A6NHJ4 632 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 DEFB108AA8MXU0 73 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 HACD1B0YJ81 288 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 H7BY64 318 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 ERN1O75460 977 aaKnown RBP11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 P04436 131 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 CASQ1P31415 396 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 SOX3P41225 446 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 CPA2P48052 419 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 DNASE1L1P49184 302 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 BTG2P78543 158 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 ANKRD20A4Q4UJ75 823 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 ANKRD20A2Q5SQ80 823 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 ANKRD20A1Q5TYW2 823 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 ANKRD20A3Q5VUR7 823 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 NSUN5P2Q63ZY6 315 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 MFSD7Q6UXD7 560 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms