RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 DPCDQ9BVM2 203 aaPredicted RBP12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 AMBNQ9NP70 447 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 TLR8Q9NR97 1041 aaKnown RBP12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 HPF1Q9NWY4 346 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 PCTPQ9UKL6 214 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 ACSL5Q9ULC5 683 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 MGAT4AQ9UM21 535 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 WDPCPO95876 746 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 RAB25P57735 213 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 VEPH1Q14D04 833 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 LDB1Q86U70 411 aaPredicted RBP12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 LINGO1Q96FE5 620 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 SHARPINQ9H0F6 387 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 PDFQ9HBH1 243 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 ING4Q9UNL4 249 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 CLCA3PQ9Y6N3 262 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 NPEPPSL1A6NEC2 478 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 NCF1BA6NI72 391 aaPredicted RBP12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 NCF1CA8MVU1 366 aaPredicted RBP12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 FAM220BPB1ANY3 271 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 F5H5T6 163 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 LDB2O43679 373 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 WBP4O75554 376 aaKnown RBP12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 OR4F21O95013 312 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 CSF3P09919 207 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 NCF1P14598 390 aaPredicted RBP12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 ZP3P21754 424 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 S100A3P33764 101 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 NUP62P37198 522 aaPredicted RBP12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 PTGER3P43115 390 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 SLC10A7Q0GE19 358 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 SERINC3Q13530 473 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 ZRANB3Q5FWF4 1079 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 CCDC149Q6ZUS6 474 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 ARRDC2Q8TBH0 407 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 TRIB3Q96RU7 358 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 TTPALQ9BTX7 342 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 MS4A7Q9GZW8 240 aaPredicted RBP12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 MARCH2Q9P0N8 246 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 MARCH4Q9P2E8 410 aaPredicted RBP12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 RAB23Q9ULC3 237 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 BAIAP2Q9UQB8 552 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 TMEM5Q9Y2B1 443 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 SEC22BO75396 215 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 POU1F1P28069 291 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 EPHA2P29317 976 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 OR1E1P30953 314 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 FOXA1P55317 472 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 ELAVL2Q12926 359 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 DUSP4Q13115 394 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 RPA4Q13156 261 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 EXOSC2Q13868 293 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 LARS2Q15031 903 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 FBXO43Q4G163 708 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 PTRHD1Q6GMV3 140 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 PRSS55Q6UWB4 352 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 KCNJ9Q92806 393 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 ISG20Q96AZ6 181 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 SCLYQ96I15 445 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 QRFPRQ96P65 431 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 FAM126AQ9BYI3 521 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 CLEC4MQ9H2X3 399 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 IL1RAPQ9NPH3 570 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 FKBP7Q9Y680 259 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 SLC38A8A6NNN8 435 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 KHNYNO15037 678 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 PLA2G10O15496 165 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 TPOP07202 933 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 PRPS2P11908 318 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 ZNF7P17097 686 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 HOXA1P49639 335 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 ARSDP51689 593 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 LIMK1P53667 647 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 EPHA5P54756 1037 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 PLIN5Q00G26 463 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 KLHL5Q96PQ7 755 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 KCNA7Q96RP8 456 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 SPOCK3Q9BQ16 436 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 WWOXQ9NZC7 414 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 UBQLN2Q9UHD9 624 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 KLK4Q9Y5K2 254 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 TRAV20A0A0B4J274 112 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 A0A1B0GVM2 712 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 H3BNC9 293 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 SCAMP3O14828 347 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 HOXA2O43364 376 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 KLK8O60259 260 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 PCDHGA12O60330 932 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 CRISP3P54108 245 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 CREMQ03060 361 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 ABRQ12979 859 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 INO80DQ53TQ3 878 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 LYPLAL1Q5VWZ2 237 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 TFAP2EQ6VUC0 442 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 TRILQ7L0X0 811 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 PHF21AQ96BD5 680 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 RHBDF1Q96CC6 855 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 NSUN5Q96P11 429 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 C1QTNF6Q9BXI9 259 aa12.94□□□□□ -0.34
SYNGAP1-204ENST00000449372 MAGEH1Q9H213 219 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms