RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 GALNT18Q6P9A2 607 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 PAOXQ6QHF9 649 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 TRPM8Q7Z2W7 1104 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 METTL27Q8N6F8 245 aaPredicted RBP13.89□□□□□ -0.19
TNF-208ENST00000449264 ACOT4Q8N9L9 421 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 EGLN2Q96KS0 407 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 STRADBQ9C0K7 418 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 PRDM7Q9NQW5 492 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 SERTAD3Q9UJW9 196 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 CDV3Q9UKY7 258 aaKnown RBP13.89□□□□□ -0.19
TNF-208ENST00000449264 RARRES3Q9UL19 164 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 NAALAD2Q9Y3Q0 740 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 SCN2AQ99250 2005 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 A0A088AWK7 358 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 A0A0A6YYD5 115 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 H3BMH7 237 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 PSMD12O00232 456 aaPredicted RBP13.88□□□□□ -0.19
TNF-208ENST00000449264 RRP9O43818 475 aaKnown RBP13.88□□□□□ -0.19
TNF-208ENST00000449264 TMPRSS11DO60235 418 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 MT-CO3P00414 261 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 CSRP1P21291 193 aaKnown RBP13.88□□□□□ -0.19
TNF-208ENST00000449264 ZNF10P21506 573 aaPredicted RBP13.88□□□□□ -0.19
TNF-208ENST00000449264 ATP5A1P25705 553 aaKnown RBP13.88□□□□□ -0.19
TNF-208ENST00000449264 ATP4BP51164 291 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 MTTPP55157 894 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 TAS2R50P59544 299 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 UFM1P61960 85 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 OLR1P78380 273 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 HERC3Q15034 1050 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 PDCD4Q53EL6 469 aaKnown RBP13.88□□□□□ -0.19
TNF-208ENST00000449264 CDCP2Q5VXM1 449 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 FOXR1Q6PIV2 292 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 PDSS2Q86YH6 399 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 PARP9Q8IXQ6 854 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 KRTCAP2Q8N6L1 136 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 OR9A4Q8NGU2 314 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 CTRCQ99895 268 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 DDX31Q9H8H2 851 aaKnown RBP13.88□□□□□ -0.19
TNF-208ENST00000449264 ANKHQ9HCJ1 492 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 APMAPQ9HDC9 416 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 SDR39U1Q9NRG7 319 aaPredicted RBP13.88□□□□□ -0.19
TNF-208ENST00000449264 SIRT5Q9NXA8 310 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 CCDC167Q9P0B6 97 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 AKAP7Q9P0M2 348 aaPredicted RBP13.88□□□□□ -0.19
TNF-208ENST00000449264 NDOR1Q9UHB4 597 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 ADAM29Q9UKF5 820 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 CROCCQ5TZA2 2017 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 KNTC1P50748 2209 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 SEC16AO15027 2179 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 FER1L5A0AVI2 2057 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 A0A0A6YYC8 382 aaPredicted RBP13.88□□□□□ -0.19
TNF-208ENST00000449264 FITM1A5D6W6 292 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 I3L1I5 382 aaPredicted RBP13.88□□□□□ -0.19
TNF-208ENST00000449264 SGK494L7N484 410 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 AKAP10O43572 662 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 B3GALT2O43825 422 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 KLHL18O94889 574 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 SMIM10L1P0DMW3 83 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 CCL4P13236 92 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 GPX3P22352 226 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 PIK3R1P27986 724 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 TSFMP43897 325 aaKnown RBP13.88□□□□□ -0.19
TNF-208ENST00000449264 ARFIP1P53367 373 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 KLF10Q13118 480 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 SLAMF1Q13291 335 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 ISXQ2M1V0 245 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 MUM1Q2TAK8 710 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 AGKQ53H12 422 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 TLDC1Q6P9B6 456 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 GK5Q6ZS86 529 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 TTLL10Q6ZVT0 673 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 TREML1Q86YW5 311 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 ARHGEF39Q8N4T4 335 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 CPSF7Q8N684 471 aaKnown RBP13.88□□□□□ -0.19
TNF-208ENST00000449264 EFCAB3Q8N7B9 438 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 C16orf78Q8WTQ4 265 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 SMIM10Q96HG1 83 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 TEX37Q96LM6 180 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 DEPDC7Q96QD5 511 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 CMKLR1Q99788 373 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 NDC1Q9BTX1 674 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 CCDC106Q9BWC9 280 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 DPY30Q9C005 99 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 SLC7A5P2Q9GIP4 190 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 ROGDIQ9GZN7 287 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 ACTL8Q9H568 366 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 CUTCQ9NTM9 273 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 DHCR7Q9UBM7 475 aaKnown RBP13.88□□□□□ -0.19
TNF-208ENST00000449264 FBXW2Q9UKT8 454 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 CLCA2Q9UQC9 943 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 LOXL2Q9Y4K0 774 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 SLC22A7Q9Y694 548 aa13.88□□□□□ -0.19
TNF-208ENST00000449264 NR5A2O00482 541 aa13.87□□□□□ -0.19
TNF-208ENST00000449264 SLC30A4O14863 429 aa13.87□□□□□ -0.19
TNF-208ENST00000449264 ZNF749O43361 778 aa13.87□□□□□ -0.19
TNF-208ENST00000449264 GALR3O60755 368 aaPredicted RBP13.87□□□□□ -0.19
TNF-208ENST00000449264 RDH16O75452 317 aa13.87□□□□□ -0.19
TNF-208ENST00000449264 SLC22A3O75751 556 aa13.87□□□□□ -0.19
TNF-208ENST00000449264 IL3P08700 152 aa13.87□□□□□ -0.19
TNF-208ENST00000449264 CD1EP15812 388 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms